Transcript Information: S_Transcript_384972.p1


Annotated TAIR IDAT5G33340.1
Annotated Gene NameEukaryotic aspartyl protease family protein
Annotated Gene Symbol(s)CDR1
Annotation TypeHomolog
Chromosome Positionchr5:12594474-12595787 | Forward length=437
E-Value2E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18417301892859
Replicate 20.30536732951578
Replicate 30.12763139158201
Condition 2: 8 Hour
Replicate 10.073790277913955
Replicate 20.15482248193582
Replicate 30.88508709778469
Condition 3: 24 Hour
Replicate 10.15117566429477
Replicate 20.15684298668752
Replicate 30.17454702010461


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_384972.p1 GENE.S_Transcript_384972~~S_Transcript_384972.p1 ORF type:5prime_partial len:289 (+),score=35.23,TAXi_C|PF14541.2|9.4e+03,TAXi_C|PF14541.2|1.7e-27,TAXi_N|PF14543.2|4.3e-18,TAXi_N|PF14543.2|4.1e+03,Asp|PF00026.19|4.8e-10 S_Transcript_384972:3-869(+)
ATCCCTTGTGACTCTCAGTCTTGCACGCCTACTGATCTTTCAGGTCGTAGCGGTTGTCTAAAAGATTATCCTAACTGTGTTTATGACTATAGTTACGGGGATAAAACCGAAAGTGTTGGTTATCTTGCTAAGGAGACCATTAGCTTCACATCATCAGTTGATGGTACATCAATACCATTTCCTAACTCCACCTTCGGATGTGGGCTTGCACAGAAAGGAAGCTTCGGAAACAAAGGTAATGGCATCTTTGGGCTTGGAGTTGGGCCTTCGTCCCTAATCTCCCAGCTCGGCCCAAATATCAACTACAAATTCTCCTACTGTCTGACTCCTCTGTCTTTAGGGGTCACCAGTAAAATGAAATTTGGGGCTGATATGGGGAGCCCCGGAGTTGTGTCAACTCCTTTTACAATCCAAGACCCTCCTACAAATTACTACCTCACATTAGATGGAATTAGCATGGGAGGTAATACTGTCAATGTGGGGCAAGACGTGATCATCGACTCTGGTACCACTCTGACATACCTCGAGTCAAGTGTCTACAGTGGCGTCAGGACTGCCATCAGTGGTGCCATTGGACTCAGCCCGGTGACTGACACCGACAAAAACTATGACCTTTGCTATCAAGTGCAACAGTCAGGAGGAGATTTTAGCCCTCCTGATGTAGTGTTTCATTTCAAAGGGGCTGATGTTAAGTTGAAGGCAGCTAACATCTTCAGGCAAATACAGGATGATTTGGTTTGTTTGGCAATGTTGCCTACAAAAGATAGTTCCATATTTGGGAATATTGCTCAAGTTAACTTTGAGGTTGGATATGATTTACAAGCTATGCAGGTGTCTTTTGCTCCTGCAGACTGCACCAGTTACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_384972.p1 GENE.S_Transcript_384972~~S_Transcript_384972.p1 ORF type:5prime_partial len:289 (+),score=35.23,TAXi_C|PF14541.2|9.4e+03,TAXi_C|PF14541.2|1.7e-27,TAXi_N|PF14543.2|4.3e-18,TAXi_N|PF14543.2|4.1e+03,Asp|PF00026.19|4.8e-10 S_Transcript_384972:3-869(+)
IPCDSQSCTPTDLSGRSGCLKDYPNCVYDYSYGDKTESVGYLAKETISFTSSVDGTSIPFPNSTFGCGLAQKGSFGNKGNGIFGLGVGPSSLISQLGPNINYKFSYCLTPLSLGVTSKMKFGADMGSPGVVSTPFTIQDPPTNYYLTLDGISMGGNTVNVGQDVIIDSGTTLTYLESSVYSGVRTAISGAIGLSPVTDTDKNYDLCYQVQQSGGDFSPPDVVFHFKGADVKLKAANIFRQIQDDLVCLAMLPTKDSSIFGNIAQVNFEVGYDLQAMQVSFAPADCTSY*

Click here to download the sequence:
Link to NCBI Protein BLAST