Transcript Information: S_Transcript_38503.p1


Annotated TAIR IDAT1G27070.1
Annotated Gene Name5'-AMP-activated protein kinase-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9396945-9399225 | Reverse length=532
E-Value2.6E-117
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.92829971187
Replicate 214.433600645103
Replicate 314.099213192883
Condition 2: 8 Hour
Replicate 122.80023039514
Replicate 221.284618612375
Replicate 320.718207017926
Condition 3: 24 Hour
Replicate 112.086141146198
Replicate 211.649622772889
Replicate 312.870314247844


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38503.p1 GENE.S_Transcript_38503~~S_Transcript_38503.p1 ORF type:complete len:535 (+),score=126.47,AMPK1_CBM|PF16561.1|2.3e-18 S_Transcript_38503:317-1921(+)
ATGCTCTCGTTTATTGCAGCCACCCATCTCACTGTTTCTTATCAACCCTTTTCATATTTGAACACAACAAGACGCTTGTTCCCCATAGTTTTGGTCATAAGCCCTCCAAGTAGACAACACCCACTTAGCTTAAAGAGGAAACACGTGCAACAAAAGAAGCAAAATCAGTTCTTTTTTGAGTTTTCTGATTTTTGTGGTTGTGAGGTTGTGAGGATGTGTAAGAAATGGGAAGGGGAAAGTGACCCTGGTTTGGAGCTTGAAGTGTTGGAATTTATGAAAAAATCTAAGAACCCAGATATGTTTCCCAGTAAAAGGGAGTTGATTGAGGCTGGGAGATTGGATTTGGTTGAGGCTATTATGAAGAGAGGTGGGTGGATGTCAATGGGTTGGGAAGATGATATTGAGGTTGAGACAGTGGAAAGAAATGTTGGGTTGGCTAGTAATTTGGAAAAGTTGGGTGAAAATGGTTGTCAAAGTGAGTTACAGCTCAATGAAAGCCAACAACATCTTGAAGGTAGTATTTCCTTTTTGGGAAATTCTTCACCAGCTGCTTCATCTTCTGGTCGATCACTAGAAATGACAGCTGAAGATGATAGCGGTATTGAGGGTATATTGAATCGATTAGAGAGACAGAGAAACCTGAGTTTTGGTCTCAGTTTGGGGAGAAATCGTAGTATGAATCATGTGTTTGGAGGTTTCGGAGAAAATAAGGAGAATGCCAGACAGTTAGAGGATTTGGCCAGTTGCCAACCTGGAAGAAGTGAACCTGCATCTTTGGGCTGTGATGGACCTAGGATTAGCGATAATGGCTTGAAAAGATCTTATGCGAATGGAAGTAGTTCTTATAAGGCAGACACATGGAGGACTTGGAGCATTCAGAGGGCTGGCTTTTCAGATAAAGAATTTGAAGCTGCAGAGATTGATTTTAGCGAAAACACAAATGGAAGGACAGTTGATATATCAGTGGATAAAATAATTGCAGTTACAGCTGATGTCGAGGAACCTTTGGACAAAACGAACGATTTGAGCTCTTGTGCTCAAAAAGTCTCTCAAAGTGATGTTAAGACTCGTCTTCAGCATCTTGAAGTGGAGCTTTCATCTGTGCTCCGCACATTAAGGTCAAACACCGGTGGCTTGTCAGAGAAGGCTAGGGAGCCATTGTCTGAAGACTTGAGACAGCTTTCTGATGCTTCAGAGTTCCAGGAAAATGAAATCATGAATGCACAGGACAACTTGAGGTCAATACGGGCAAAGCTAGCAGTATTAGAAGGGAAAATATCACTAGCAATAATTGGTGCTCAGAAATTATTGGATGAGAAGCAGAAGAGGATTAATAGTGCTCGTAGCGCTCTCCAACTTCTTTGTACTACCTGTATTGTTTGGCCTAATTCTGGTTCGGAGGTGCAGTTAGCAGGCTCCTATGATGGCTGGGCTACTCAGAGAAAGATGGAGAAGTCAAGTGCTGGCATTTTTTCGTTGTACTTGAAGCTGTACCCTGGCAAATATGAGATTAAGTTCATTGTTGACGGCTCGTGGAAGGTTGATCCCCTTCGTCCTATAGTAAACAATAATGGGTTCGAGAACAATCTTCTTATTATCACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38503.p1 GENE.S_Transcript_38503~~S_Transcript_38503.p1 ORF type:complete len:535 (+),score=126.47,AMPK1_CBM|PF16561.1|2.3e-18 S_Transcript_38503:317-1921(+)
MLSFIAATHLTVSYQPFSYLNTTRRLFPIVLVISPPSRQHPLSLKRKHVQQKKQNQFFFEFSDFCGCEVVRMCKKWEGESDPGLELEVLEFMKKSKNPDMFPSKRELIEAGRLDLVEAIMKRGGWMSMGWEDDIEVETVERNVGLASNLEKLGENGCQSELQLNESQQHLEGSISFLGNSSPAASSSGRSLEMTAEDDSGIEGILNRLERQRNLSFGLSLGRNRSMNHVFGGFGENKENARQLEDLASCQPGRSEPASLGCDGPRISDNGLKRSYANGSSSYKADTWRTWSIQRAGFSDKEFEAAEIDFSENTNGRTVDISVDKIIAVTADVEEPLDKTNDLSSCAQKVSQSDVKTRLQHLEVELSSVLRTLRSNTGGLSEKAREPLSEDLRQLSDASEFQENEIMNAQDNLRSIRAKLAVLEGKISLAIIGAQKLLDEKQKRINSARSALQLLCTTCIVWPNSGSEVQLAGSYDGWATQRKMEKSSAGIFSLYLKLYPGKYEIKFIVDGSWKVDPLRPIVNNNGFENNLLIIT*

Click here to download the sequence:
Link to NCBI Protein BLAST