Transcript Information: S_Transcript_38524.p1


Annotated TAIR IDAT1G76170.1
Annotated Gene Name2-thiocytidine tRNA biosynthesis protein, TtcA
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28584179-28586225 | Reverse length=332
E-Value3.6E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.5622465049686
Replicate 20.93223054468372
Replicate 30.51951369249579
Condition 2: 8 Hour
Replicate 11.0512516353516
Replicate 20.78774114928615
Replicate 31.0507812199639
Condition 3: 24 Hour
Replicate 10.61534883072096
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38524.p1 GENE.S_Transcript_38524~~S_Transcript_38524.p1 ORF type:complete len:142 (+),score=21.44,ATP_bind_3|PF01171.16|3.2e-09 S_Transcript_38524:680-1105(+)
ATGGATGGACATGAAATTGTGAAAATGATAGGCCTAAAGAACAACTGTACTTTTTGTGGAGTATTCAGACGACAGGCCCTAGATCGAGGCGCTTCAATGTTGAAAGTAGAGAAGCTTGTCACTGCACATAATGCCAATGATATTGCTGAAACAGTGCTCTTGAACATACTACGGGGTGATATTGCCAGACTGAGTAGATGCACCTCAATAACCACTGGTGAAGATGGACCAATTCCAAGATGCAAGCCATTTAAGTACACATACGAGAAGGAGATTGTTATGTATGCATATTTCAAGAAGCTGGATTACTTTTCCACTGAATGTATCTATTCTCCAAATGCATATCGTGGTTTCGCACGGGAGTTCATTAAAGATTTAGAGAGGATCAGAAATGGTGTAAGGCTTGTGTTTTGCTTGAAGGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38524.p1 GENE.S_Transcript_38524~~S_Transcript_38524.p1 ORF type:complete len:142 (+),score=21.44,ATP_bind_3|PF01171.16|3.2e-09 S_Transcript_38524:680-1105(+)
MDGHEIVKMIGLKNNCTFCGVFRRQALDRGASMLKVEKLVTAHNANDIAETVLLNILRGDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERIRNGVRLVFCLKG*

Click here to download the sequence:
Link to NCBI Protein BLAST