Transcript Information: S_Transcript_38601.p1


Annotated TAIR IDAT1G51080.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; Has 101 Blast hits to 98 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 10; Plants - 27; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18929883-18930740 | Reverse length=285
E-Value1.9E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.069585964582
Replicate 229.19076772225
Replicate 330.714248939227
Condition 2: 8 Hour
Replicate 124.114095204758
Replicate 230.374086807013
Replicate 323.03751221923
Condition 3: 24 Hour
Replicate 124.029371839654
Replicate 227.719584927994
Replicate 324.931020815826


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38601.p1 GENE.S_Transcript_38601~~S_Transcript_38601.p1 ORF type:complete len:260 (-),score=54.76,QSregVF_b|PF12843.3|1.1e-05 S_Transcript_38601:225-1004(-)
ATGACTACCTTCTTTGGACATCACCGATTGCATACTTTTCTGAGCTCTTCTAACTTCCAATGCTCTCCAAAACCAAAACCCTTGAAATGCTTCCCCATTTATGCTGCAATTCCAGCAAGGGACAGAGTCATAGACTTTGGAAAATACAAAGGCAGAATGTTGGGAACACTTCCCTCAACTTACCTCAAATGGGTCTCCAACAATCTCAGAGCAAGGGACTTTGAGGAATGGGCTAAGCTGGCTGACCAAGTAGTCCAAGACCCAGTCTATAATGACCGTCTCGAATGGGAGTTTGCTGAGAAGTTTCTCAATGGTGATGTCTTGGCTGCCAATTCCAAGTCTGAGGGCACTGCAGTCGCTGAGTTGCTTGAGATAAGCCAGAGGTTTGGCTGGGATAACGATGATAAGCAGGGTTGGAGTAAGGTCGATTTCAAGCTACTCGGGACCTCAAAAGGCGGGAGAATACCTAGGTTGAAGGAGAAGAAAGAAAGCAAGCATGCCAAGTTGAAGATCACAGAAGCTGAGAATGACAAAGGACTACTAGGAGGAGTTAAAGAGAGGAGAGTTGAGAGAAGAATGAGGTCGAAAATGAGAAGAGGGATCATGCCATTGCCAAACTTGAATGACAGGAGGCTTAACATTAGTGTAGGTGCTGACATTGGTCATGACAATGAGGGAAGTTGTGATCAAACTAACGAGGTTTATAATCCATTTCCCGGTAGAGAAACTCTTTTGCAAAAGGCTCTCAGTCAGAGAAGAATTAATCATCAACAAAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38601.p1 GENE.S_Transcript_38601~~S_Transcript_38601.p1 ORF type:complete len:260 (-),score=54.76,QSregVF_b|PF12843.3|1.1e-05 S_Transcript_38601:225-1004(-)
MTTFFGHHRLHTFLSSSNFQCSPKPKPLKCFPIYAAIPARDRVIDFGKYKGRMLGTLPSTYLKWVSNNLRARDFEEWAKLADQVVQDPVYNDRLEWEFAEKFLNGDVLAANSKSEGTAVAELLEISQRFGWDNDDKQGWSKVDFKLLGTSKGGRIPRLKEKKESKHAKLKITEAENDKGLLGGVKERRVERRMRSKMRRGIMPLPNLNDRRLNISVGADIGHDNEGSCDQTNEVYNPFPGRETLLQKALSQRRINHQQR*

Click here to download the sequence:
Link to NCBI Protein BLAST