Transcript Information: S_Transcript_386097.p1


Annotated TAIR IDAT3G08780.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; Has 129 Blast hits to 129 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 96; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:2666376-2667452 | Reverse length=313
E-Value6E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.1944054599127
Replicate 23.4235363106489
Replicate 35.087651333407
Condition 2: 8 Hour
Replicate 15.6990267226821
Replicate 29.8358989709143
Replicate 36.0639911290033
Condition 3: 24 Hour
Replicate 15.8378567949002
Replicate 23.9075537200599
Replicate 35.4357854321371


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_386097.p1 GENE.S_Transcript_386097~~S_Transcript_386097.p1 ORF type:5prime_partial len:116 (-),score=30.58 S_Transcript_386097:167-514(-)
AGAGAAGGAGGAGAGGAGAGAGAGAAATGGCCGAAGAGTAGACCGGAGATGTCGCCTTCTGACGATGTGAACCGGTTTATTAGAGAAGAGAGGGTGGGCCAGATGAAGAAAGTCTCAAAGGACCAGAAGGATCTGGATTGCTATGCGGAGGGATTTCCGGTAGCGAATTTGAACAGGTTGATTGGATCCGAGGCGGTTAGTTATATGTCTGGGCTTGAGGATTTGTATGAGAAGATGCTCACTAGGCTTGATTCCTTGTCTAAGCTTGTTGAGTCCTCTTCTCTCAAGGTCCTTCAACAGGAAAATCACAACATGAAGTTGAGGCACCGGATTGCTGGCATTGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_386097.p1 GENE.S_Transcript_386097~~S_Transcript_386097.p1 ORF type:5prime_partial len:116 (-),score=30.58 S_Transcript_386097:167-514(-)
REGGEEREKWPKSRPEMSPSDDVNRFIREERVGQMKKVSKDQKDLDCYAEGFPVANLNRLIGSEAVSYMSGLEDLYEKMLTRLDSLSKLVESSSLKVLQQENHNMKLRHRIAGIE*

Click here to download the sequence:
Link to NCBI Protein BLAST