Transcript Information: S_Transcript_38628.p1


Annotated TAIR IDAT3G22380.2
Annotated Gene Nametime for coffee
Annotated Gene Symbol(s)TIC
Annotation TypeOrtholog
Chromosome Positionchr3:7913181-7918967 | Forward length=1555
E-Value5.4E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.545583360667
Replicate 237.86811552501
Replicate 338.507161029725
Condition 2: 8 Hour
Replicate 151.328008418479
Replicate 254.020300034374
Replicate 350.441380754891
Condition 3: 24 Hour
Replicate 135.592094652778
Replicate 234.230170587725
Replicate 333.571410828879


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38628.p1 GENE.S_Transcript_38628~~S_Transcript_38628.p1 ORF type:complete len:1160 (+),score=300.85 S_Transcript_38628:692-4171(+)
ATGATGGACAGAAATAGAGAAGCTCGAAGAGCGGCGGCTATGGCGAATGGCTTGCCTAGAAGAAGACACAGAACCACCACCGGAAGTCTTAGGGACTCACCAGAGGATGACGGTCCAATGGAATTACAAGAGACGGCTCGATTGAGAGATCGGACGGCGAAGAAAGACAGAGATCGAGAAATAAGAGACCGAGACCGTGACCGTGACCGCGATAGAGAACGCGACCGTGACCGAGAACGTGACCGGGACCGAGACCGGGAGAGAGAAAGGCTGAGCAGGAGTAAGAGGCGGAGAGGGGTAGATAAGTATATGCACGGGAGTAATAGAGAAGATGGTGGTGTTGGTGATGACAGCTCAGAAGAGAGCGTAAATGATGAAGAAGATGACGACGGACCCGTTCGTTACAACGTTCCGACACCGTCATCGAATCCTATTCCCATGTCATCCTCTTCACCAGCTTCCTCTACTCTTACTAGTCACCGGAAGAGCTACCCACCTCCGACGAAGGTCTTTCGGACTAGCACTGCTCCCACTTGGAAGGCTCCTGATGAAATGATCGGTGTTTCCGTCCCTCGGAAGGCCCGCTCTGCGTCGACGAAGAGGTCGCATGATTGTTGGAGCTCTGGTGGTGGTGGTGGTGTAGTGGGAGGAGAGCAGCTTCACAGACAAGCCTCATCGTCGCCGGTGAGGTCAACGATGACGGCAGTAGTGGTAGGACCACCGCCAGCTCCTTCATCAATACCAGCTCCGATGTCACCGTCATCATCAAATGTCTCAATCAAGAAGAAAATTAAGCCAAACTGCCCAAAACAGAAGCCCCCGAAGTCGTCTTCGTCGTGTCCGAAATCATCACCGTCACCGTCGTCGATACAGGACGAGATTGAGATCGAGGTTGCCGAGGTGTTATATGGGTTGATGAGACAATCCCAAGCCCCTTGTTCATCCAAGCAAGAGGGTTTGTTGTCCAATGATTTAGCCACCAGAGATATCAACAGATCTACCGGTGATTCGAAATCTCGAGTTTCATCTCCGATCTCTGCTCCTCCCCAGAATACCACCTCTTCAGCTTCTCCTTTCACTACCGTTGCTCCTAAGAGAAAACGGCCACGCCCGTACCCGGATGAAAATCCTCGGAGCAGCCCCATTTCGAAACCGGAAATAGATCAACCCGTTAAACCAGAGGCATCGTTGCCGGGATCTGCGGTGGAAAACGGCGATTTGCTGAAGTCCAATGATCCCACTCCACCTTTAGAACCGGTGGCGAACGGTGTAAGTTCATCGGATGTGAAACCGATGGTAATGGAAGAATCAGTGGGAATGGTTGTGAGAGGTGCTAAAGTGGAGGAAGCTTCGTCCTCATCCCCTAATACAGAATCACCAGATCACCATCGTGTAGAATCCGCATCTACATCCACTAAACCAACCTCAACTCTTGGTGGTGAGAAGGAGACGCATAGAGAAGAGAAGTTCGAGATAGATCTCATGGCGCCACCACCGCAGTCAAGGGGGTCGCCGGAGAGAGGGGAGGCGGAGTACGGAGGAGTTGGAGGGGGAATGAATATGATGGGAGGAGATGAGAAGTCTATGGTCACGGATAGGGAGGCGGAAGGAAAGGCAAAGGGGGTAGGAAGGGCAAATGAGGAAGGCGATGGTAAAGCAGTAGCAGTGAATGTGAATGTGAATGTGAACTCTGCTTCTGCTGAGCCTGAGATTCAGATTCAGGCTGAGCCCAAGTCTAAGGCTAAGGCTAATGGTGCTGTTGTTGTGGGCCCAGAAAGTGAGCCCCACAAGCAGCCGTCACTGCCACCTCAGCATCAACATCACCATCTCAATGTTAATGACCAGAACCACAAGGAGAGAAACATTGATTTGCAGCTTGATCTTGAGAAGTCTGATCGTCCCTCTGGTGTGAACGACACCAAGTTGAACCTGCACAAACATCCACCGCCTAAACCCTCCAAAGATGACGCTCTTGCTGACATCAAACCTGGAGGAGGTCAAGCAAGCTCAGTGCCATTGGCAATGTCAGTTCCTGCAGGATGGCCTGGAGGGCTTGGACCCATGGGATATATGGCGCCATTACAAGGAGTGGTTTCAATGGATGCAAGTACAATGGCTTCTCCACCTATGCAGCATCCCCATTTCATGTTCTCACAGCCGAAGCCAAAGAGGTGTGCAACTCACTGCTACATAGCAAGGAGCATATCAGCTCACCAGCAAATGATGAAGATGAACCCCTTTTGGCCTGCACCTGGTTCTGCCCCTCTCTATGGTGCCAAGCCTCCTTACAATCTCAACATGGTTCCTCCTGCTGATTTGCATGCTGCTGCTACTGCTACTGCCAGAGGAACTGTTGTTAACTCTGCCCAAGATAATACTAATAAAGCTGGTGGTCAACCTTTTGCTTTCTTCCCTGGTCAGCCTGCTTCCAAGGACAAATCTCCTCAGCCAGCCATTGCCCCTGATTCTGCCCAGAAAAAGCAGCAGTTCCTTCTTCCCCAGAGCTTACCTCCTGGCACTCCCAGCAATGTTTTGCATGCCCCTGCCTTCTTCTTCCCATTTGGGCAACAACAGCCAGCAGCAGCAGCAGCAGCTGCCCGTCTCGGCTCTGGGAAATCTCCATCAACAGGTGGTAGTGCGGCGGTGTCAACAGCCACAACTACCGCAGCTCCGATGGGGAGTTCGTCCACCCCAACACCGGCTGTTGGTCCGGCAATGAGCTTCAGTTATCCAAACATGGCTGGGAATGAGGCTCAGTTCATGGCAATTTTGGGGAATGGAGCATACCCCTTCCCCATTCCGGCACATGTTGGAGCTGCACCACCTTACAGAGGATCCCATCCTCAGGCAATGTCTTTCTTCAATGGCTCGTTCTACTCATCCCAGATGCTACACCCTTCACAATTACAGCAACAGCAACAACAGCAATCGGCAGCACCCTCTCAGTCTTTGCAGATCCAACAGCAGCAAAGTCATCAGAATCCGAGCCTTTCTACTGCTTCCTCGTCTTCCCAGAAGCAGCAGCATTTACAGAACCAGCAACAGAGGCCCCAAGGAAGCAGTGCTAATGGTGGTACCGGGACCTCAAATCAAAGCATGCAGAATTTTCAAGGTGCTAAAGGTCGGACATCCCATGATATGGGGGGTGAGGACAGCCCTTCAACTGCAGACAGCCGTAACCGACCTAATCTTGGTGTCTATGGCCAGAACTTCGCCATGCCTTTCCATCATCCGAATTTTGCTTTGATGACTCCGCCTTCCTCCCTTGGCCCTGGTGTTGCCAGTGCTGCTAGTGGTGGTAATCATGGTGATAATAAGAAGCAACAGCAGCAACAACAGCAACAATCTCAACAACAGCCTTTTCCTATGTCTTTTGCTTCCATTAATGGTTCTACCACTCCTGGGGGGGCCCTCGACATATCTTCAATGGCTCACAATCATGCTATTATCCAGAGGCTGCTCGACAGAATTATCAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38628.p1 GENE.S_Transcript_38628~~S_Transcript_38628.p1 ORF type:complete len:1160 (+),score=300.85 S_Transcript_38628:692-4171(+)
MMDRNREARRAAAMANGLPRRRHRTTTGSLRDSPEDDGPMELQETARLRDRTAKKDRDREIRDRDRDRDRDRERDRDRERDRDRDRERERLSRSKRRRGVDKYMHGSNREDGGVGDDSSEESVNDEEDDDGPVRYNVPTPSSNPIPMSSSSPASSTLTSHRKSYPPPTKVFRTSTAPTWKAPDEMIGVSVPRKARSASTKRSHDCWSSGGGGGVVGGEQLHRQASSSPVRSTMTAVVVGPPPAPSSIPAPMSPSSSNVSIKKKIKPNCPKQKPPKSSSSCPKSSPSPSSIQDEIEIEVAEVLYGLMRQSQAPCSSKQEGLLSNDLATRDINRSTGDSKSRVSSPISAPPQNTTSSASPFTTVAPKRKRPRPYPDENPRSSPISKPEIDQPVKPEASLPGSAVENGDLLKSNDPTPPLEPVANGVSSSDVKPMVMEESVGMVVRGAKVEEASSSSPNTESPDHHRVESASTSTKPTSTLGGEKETHREEKFEIDLMAPPPQSRGSPERGEAEYGGVGGGMNMMGGDEKSMVTDREAEGKAKGVGRANEEGDGKAVAVNVNVNVNSASAEPEIQIQAEPKSKAKANGAVVVGPESEPHKQPSLPPQHQHHHLNVNDQNHKERNIDLQLDLEKSDRPSGVNDTKLNLHKHPPPKPSKDDALADIKPGGGQASSVPLAMSVPAGWPGGLGPMGYMAPLQGVVSMDASTMASPPMQHPHFMFSQPKPKRCATHCYIARSISAHQQMMKMNPFWPAPGSAPLYGAKPPYNLNMVPPADLHAAATATARGTVVNSAQDNTNKAGGQPFAFFPGQPASKDKSPQPAIAPDSAQKKQQFLLPQSLPPGTPSNVLHAPAFFFPFGQQQPAAAAAAARLGSGKSPSTGGSAAVSTATTTAAPMGSSSTPTPAVGPAMSFSYPNMAGNEAQFMAILGNGAYPFPIPAHVGAAPPYRGSHPQAMSFFNGSFYSSQMLHPSQLQQQQQQQSAAPSQSLQIQQQQSHQNPSLSTASSSSQKQQHLQNQQQRPQGSSANGGTGTSNQSMQNFQGAKGRTSHDMGGEDSPSTADSRNRPNLGVYGQNFAMPFHHPNFALMTPPSSLGPGVASAASGGNHGDNKKQQQQQQQQSQQQPFPMSFASINGSTTPGGALDISSMAHNHAIIQRLLDRIIR*

Click here to download the sequence:
Link to NCBI Protein BLAST