Transcript Information: S_Transcript_38694.p1


Annotated TAIR IDAT5G24270.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)SOS3, CBL4, ATSOS3
Annotation TypeHomolog
Chromosome Positionchr5:8238781-8240179 | Reverse length=222
E-Value4E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3027007985022
Replicate 23.5670378326521
Replicate 31.1043554541078
Condition 2: 8 Hour
Replicate 10
Replicate 21.2056684895661
Replicate 33.1909951504463
Condition 3: 24 Hour
Replicate 12.6161537114484
Replicate 21.0856915725196
Replicate 32.4164832962986


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38694.p1 GENE.S_Transcript_38694~~S_Transcript_38694.p1 ORF type:complete len:167 (+),score=42.84,EF-hand_1|PF00036.28|2.1,EF-hand_1|PF00036.28|5.9e-06,EF-hand_1|PF00036.28|8.5e-05,EF-hand_6|PF13405.2|0.096,EF-hand_6|PF13405.2|0.0024,EF-hand_6|PF13405.2|0.00067,EF-hand_7|PF13499.2|0.00016,EF-hand_7|PF13499.2|0.0013,EF-hand_5|PF13202.2|2.2,EF-hand_5|PF13202.2|0.0051,EF-hand_5|PF13202.2|0.2,EF-hand_8|PF13833.2|1e+02,EF-hand_8|PF13833.2|0.024,EF-hand_8|PF13833.2|1.9 S_Transcript_38694:655-1155(+)
ATGGGTTGTGGGATATCCAGAGATGATGCAAGATTGCCTGCCTCTGATAGATTTTCTGTTCTTGCTGCTGAGACTGCTTTTAGTGTGGATGAAGTGGAATCTTTGTTTGATTTATACAATAAACTCAGCAATTCTGTTGTAAAAGATGGTTATATTCAAAAGGAGGAACTTCAACTTGCCCTATTCAAGTGCAGTGATAACAGAAGCCTCTTCCTTGACAAAATGTTTGATCTCTTTGATGTCAAGAAGAATGGTCGGATCGAGTTTGGAGAATTTGTTCGAACATTGAGTGTCTTCCACCCTAAAACTCCTGAAACAAAGAAAATTGTGTATGCGTTTCGGTTGTACGATCTTAGAGGAACTGGGTACATTGAGCATGAAGAGTTGAAGGAAATGGTGTTAGCCCTTCTCCAGGAATCAGACTTGCATCTCTCAAATGAGTTAGTTGAATGTATTGTGGATAAGGCATGGAATTGCACTTCTTTTTACTTAATTGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38694.p1 GENE.S_Transcript_38694~~S_Transcript_38694.p1 ORF type:complete len:167 (+),score=42.84,EF-hand_1|PF00036.28|2.1,EF-hand_1|PF00036.28|5.9e-06,EF-hand_1|PF00036.28|8.5e-05,EF-hand_6|PF13405.2|0.096,EF-hand_6|PF13405.2|0.0024,EF-hand_6|PF13405.2|0.00067,EF-hand_7|PF13499.2|0.00016,EF-hand_7|PF13499.2|0.0013,EF-hand_5|PF13202.2|2.2,EF-hand_5|PF13202.2|0.0051,EF-hand_5|PF13202.2|0.2,EF-hand_8|PF13833.2|1e+02,EF-hand_8|PF13833.2|0.024,EF-hand_8|PF13833.2|1.9 S_Transcript_38694:655-1155(+)
MGCGISRDDARLPASDRFSVLAAETAFSVDEVESLFDLYNKLSNSVVKDGYIQKEELQLALFKCSDNRSLFLDKMFDLFDVKKNGRIEFGEFVRTLSVFHPKTPETKKIVYAFRLYDLRGTGYIEHEELKEMVLALLQESDLHLSNELVECIVDKAWNCTSFYLIG*

Click here to download the sequence:
Link to NCBI Protein BLAST