Transcript Information: S_Transcript_38697.p1


Annotated TAIR IDAT5G24270.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)SOS3, CBL4, ATSOS3
Annotation TypeHomolog
Chromosome Positionchr5:8238781-8240179 | Reverse length=222
E-Value2E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1709107854683
Replicate 25.8208210747486
Replicate 34.0024661287814
Condition 2: 8 Hour
Replicate 110.254336620579
Replicate 27.425549761271
Replicate 39.8869250593318
Condition 3: 24 Hour
Replicate 12.7887085307142
Replicate 25.2078545749905
Replicate 32.5758683647778


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38697.p1 GENE.S_Transcript_38697~~S_Transcript_38697.p1 ORF type:complete len:235 (+),score=61.88,EF-hand_1|PF00036.28|3.3,EF-hand_1|PF00036.28|9.9e-06,EF-hand_1|PF00036.28|0.00014,EF-hand_1|PF00036.28|2.2e-05,EF-hand_5|PF13202.2|3.3,EF-hand_5|PF13202.2|0.0083,EF-hand_5|PF13202.2|0.33,EF-hand_5|PF13202.2|3.2e-07,EF-hand_6|PF13405.2|0.17,EF-hand_6|PF13405.2|0.004,EF-hand_6|PF13405.2|0.0011,EF-hand_6|PF13405.2|0.022,EF-hand_7|PF13499.2|0.0003,EF-hand_7|PF13499.2|7.5e-11,EF-hand_8|PF13833.2|1.6e+02,EF-hand_8|PF13833.2|0.044,EF-hand_8|PF13833.2|0.00068 S_Transcript_38697:635-1339(+)
ATGGGTTGTGGGATATCCAGAGATGATGCAAGATTGCCTGCCTCTGATAGATTTTCTGTTCTTGCTGCTGAGACTGCTTTTAGTGTGGATGAAGTGGAATCTTTGTTTGATTTATACAATAAACTCAGCAATTCTGTTGTAAAAGATGGTTATATTCAAAAGGAGGAACTTCAACTTGCCCTATTCAAGTGCAGTGATAACAGAAGCCTCTTCCTTGACAAAATGTTTGATCTCTTTGATGTCAAGAAGAATGGTCGGATCGAGTTTGGAGAATTTGTTCGAACATTGAGTGTCTTCCACCCTAAAACTCCTGAAACAAAGAAAATTGTGTATGCGTTTCGGTTGTACGATCTTAGAGGAACTGGGTACATTGAGCATGAAGAGTTGAAGGAAATGGTGTTAGCCCTTCTCCAGGAATCAGACTTGCATCTCTCAAATGAGTTAGTTGAATGTATTGTGGATAAGACATTCAAGGAAGTCGATTTGAAGGGTGACGGCAAAATTGATATGGAAGAGTGGGAAAAATATGTAGCCAAAAATCCAGCAATGCTTAAGAACATGACTCTTCCGTATCTAATGGACATAAACCTTGCATTTCCTAGTTTTGTGGTGAACAAAGAAGCAGAATGCTTACAAAAGAGTACCCGAAAAGAAGAAGATGAAGACGACATTTCAGTCTCTTCCCATTACCTGGGTATTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38697.p1 GENE.S_Transcript_38697~~S_Transcript_38697.p1 ORF type:complete len:235 (+),score=61.88,EF-hand_1|PF00036.28|3.3,EF-hand_1|PF00036.28|9.9e-06,EF-hand_1|PF00036.28|0.00014,EF-hand_1|PF00036.28|2.2e-05,EF-hand_5|PF13202.2|3.3,EF-hand_5|PF13202.2|0.0083,EF-hand_5|PF13202.2|0.33,EF-hand_5|PF13202.2|3.2e-07,EF-hand_6|PF13405.2|0.17,EF-hand_6|PF13405.2|0.004,EF-hand_6|PF13405.2|0.0011,EF-hand_6|PF13405.2|0.022,EF-hand_7|PF13499.2|0.0003,EF-hand_7|PF13499.2|7.5e-11,EF-hand_8|PF13833.2|1.6e+02,EF-hand_8|PF13833.2|0.044,EF-hand_8|PF13833.2|0.00068 S_Transcript_38697:635-1339(+)
MGCGISRDDARLPASDRFSVLAAETAFSVDEVESLFDLYNKLSNSVVKDGYIQKEELQLALFKCSDNRSLFLDKMFDLFDVKKNGRIEFGEFVRTLSVFHPKTPETKKIVYAFRLYDLRGTGYIEHEELKEMVLALLQESDLHLSNELVECIVDKTFKEVDLKGDGKIDMEEWEKYVAKNPAMLKNMTLPYLMDINLAFPSFVVNKEAECLQKSTRKEEDEDDISVSSHYLGID*

Click here to download the sequence:
Link to NCBI Protein BLAST