Transcript Information: S_Transcript_386980.p2


Annotated TAIR IDAT5G51140.2
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20784103-20786793 | Reverse length=410
E-Value7E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31682144327596
Replicate 20.78795676991124
Replicate 30.65866914584288
Condition 2: 8 Hour
Replicate 11.0154947770063
Replicate 21.3316576571266
Replicate 32.0300807242839
Condition 3: 24 Hour
Replicate 10.78017441037836
Replicate 20.80942184201241
Replicate 30.90078730018272


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_386980.p2 GENE.S_Transcript_386980~~S_Transcript_386980.p2 ORF type:3prime_partial len:84 (-),score=24.89 S_Transcript_386980:1-249(-)
ATGGTCTTCTTCAGCAGTACTGGCCATCCAATTGCCAATGATATGCTCTACCTTGTTGAATCTATTGCTCAACGTTCCACTGAAGGAATGAGTGCTGATAGAGCTGCTGCTAAATTGAGGGATTCTTTGCAATGCAGTACTGCTGAAGAAGACCATGATGAGGGATCCTTTACAGATTTTAGTGTCGATCCTATGTGTACGAATTGTCCAAATTTGGGTCCTAAAGGGTATGGTGGTCATGAGGAGAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_386980.p2 GENE.S_Transcript_386980~~S_Transcript_386980.p2 ORF type:3prime_partial len:84 (-),score=24.89 S_Transcript_386980:1-249(-)
MVFFSSTGHPIANDMLYLVESIAQRSTEGMSADRAAAKLRDSLQCSTAEEDHDEGSFTDFSVDPMCTNCPNLGPKGYGGHEER

Click here to download the sequence:
Link to NCBI Protein BLAST