Transcript Information: S_Transcript_386982.p1


Annotated TAIR IDAT5G51140.2
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20784103-20786793 | Reverse length=410
E-Value6E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22177501029317
Replicate 20.18385657964596
Replicate 30.15368946736334
Condition 2: 8 Hour
Replicate 10.35542317195222
Replicate 20.18643207199772
Replicate 30.53289619012453
Condition 3: 24 Hour
Replicate 10.18204069575495
Replicate 20.56659528940868
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_386982.p1 GENE.S_Transcript_386982~~S_Transcript_386982.p1 ORF type:internal len:120 (-),score=31.80,PseudoU_synth_2|PF00849.18|2.4e-07 S_Transcript_386982:2-358(-)
CTTTGCCGTTTTCAGCAAGTTGTGGACTTGAACATAAATTATGATGCTCGAGAAGGAAGAAGTACTGTGGAGAGTGGAGATGGAACTGATGGTACAAAACTGAAAGGCAAGGCTGCTTGTACAAAATTTAGAAGGATAAGCACTAATGGAGTTCTGAGCATTGTCCAATGTGAACCAGTCACTGGAAGAACACATCAGATACGTGTTCATCTTCAATATACTGGCCATCCAATTGCCAACGATATGCTCTATCTTGTCGAATCTATTGCTCAACGTTCCACTGAAGGAATGAGTGCTGATAGAGCTGCTGCTAAATTGAGGGATTCTTTGCAATGCAGTACTGCTGAAGAAGACCAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_386982.p1 GENE.S_Transcript_386982~~S_Transcript_386982.p1 ORF type:internal len:120 (-),score=31.80,PseudoU_synth_2|PF00849.18|2.4e-07 S_Transcript_386982:2-358(-)
LCRFQQVVDLNINYDAREGRSTVESGDGTDGTKLKGKAACTKFRRISTNGVLSIVQCEPVTGRTHQIRVHLQYTGHPIANDMLYLVESIAQRSTEGMSADRAAAKLRDSLQCSTAEEDH

Click here to download the sequence:
Link to NCBI Protein BLAST