Transcript Information: S_Transcript_387116.p1


Annotated TAIR IDAT2G02520.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:676771-678145 | Reverse length=211
E-Value2E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53226002470361
Replicate 20.88251158230059
Replicate 31.2295157389067
Condition 2: 8 Hour
Replicate 12.8433853756177
Replicate 21.6406022335799
Replicate 31.5631621576986
Condition 3: 24 Hour
Replicate 11.8932232358515
Replicate 20.75546038587825
Replicate 31.1770287389054


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_387116.p1 GENE.S_Transcript_387116~~S_Transcript_387116.p1 ORF type:complete len:150 (+),score=24.36,zf-RVT|PF13966.2|1.5e-19 S_Transcript_387116:389-838(+)
ATGTATGATATTTGGAGACCCAAGGGAACAAGGGTAAGATGGTTGAAACTAATATGGTCATCTAATGCTATGCCCAGAGCTCAGTTTATAGCCTGGATGGCAATGCATGGAAGGCTGAAAACAAAAGCCAGACTGAAGAAGTTGGGGATCACACAGGATGAGTTATGCCCAGGATGCAACACAGAAGCTGAAACTTGTGAGCACCTGTTTTTCAAGTGCCCTAAGCATGCTGATATATGGAGGAATCTTCTCAGGTGGACAGGAGTGAGCAGGAGAACCTATGATCTGAAGAAGGAAATAAAATGGTTCTTACATAGAGGGAGGAACAGATCTATAATGCGGCAACTAAGAAGAACAGTGTTGGTGCAAACCATAGCTGAACTATGGTATGAGAGAAACTTGAGGATGTTTCAAGACAAATCAACAGCACCAGAGATCATCATTAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_387116.p1 GENE.S_Transcript_387116~~S_Transcript_387116.p1 ORF type:complete len:150 (+),score=24.36,zf-RVT|PF13966.2|1.5e-19 S_Transcript_387116:389-838(+)
MYDIWRPKGTRVRWLKLIWSSNAMPRAQFIAWMAMHGRLKTKARLKKLGITQDELCPGCNTEAETCEHLFFKCPKHADIWRNLLRWTGVSRRTYDLKKEIKWFLHRGRNRSIMRQLRRTVLVQTIAELWYERNLRMFQDKSTAPEIIIR*

Click here to download the sequence:
Link to NCBI Protein BLAST