Transcript Information: S_Transcript_38784.p1


Annotated TAIR IDAT1G15390.1
Annotated Gene Namepeptide deformylase 1A
Annotated Gene Symbol(s)PDF1A, ATDEF1
Annotation TypeOrtholog
Chromosome Positionchr1:5294653-5295625 | Forward length=269
E-Value5.5E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9529081710272
Replicate 24.4512645598495
Replicate 34.0444596674563
Condition 2: 8 Hour
Replicate 15.2378151656116
Replicate 24.2192521557379
Replicate 34.2070751851937
Condition 3: 24 Hour
Replicate 13.5450030225964
Replicate 24.3737180235056
Replicate 33.4293130550816


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38784.p1 GENE.S_Transcript_38784~~S_Transcript_38784.p1 ORF type:5prime_partial len:228 (+),score=54.63,Pep_deformylase|PF01327.17|3.3e-48 S_Transcript_38784:3-686(+)
CATCCTACAATAAGAAACTTCAGGTCCTCTGCCTCACCCAAATGGACTACCAAAGCAGGATGGTTACTGGGTCTTGGAGAAAAGAAACAACAATTGCCTGATTTGGTGAAAGCAGGTGACCCGATTCTTCATGAACCAGCTCAAGAAGTTGACCCGAAAGATATCGGGTCAGAGAGGATTCAAAAGATAATTGATGATATGGTTAAGGTTATGAGGAAGCCTCCTGGGGTTGGCCTTGCTGCTCCTCAAATTGGTATCCCTTTAAGGATTATTGTATTGGAGGATACTAAAGAGTACATCAGTTATGGACCAAAAGAGGAGATCAAAGCACAGGACAGACGCCCCTTTGATCTTCTGCTTCTAGATATGAGGCAGGTCATCGTGAATCCAAAACTCAAAAAGAAGAGCAACAGAACTGCGCTATTCTTTGAAGGCTGCCTGAGTGTTGATGGTTACAGAGCAGTTGTGGAGCGAAACCTTGATGTTCAGGTCACAGGACTGGACCGATATGGACAGCCTATTACAGTGGATGCTTCAGGATGGCAGGCACGCATTCTCCAGCATGAGTGCGACCATTTGGAGGGAACCCTCTATGTTGACAAGATGCTTCCTAAGACATTTCGAACTGTGGAAAATAGGGATTTGCCTCTTGCAGCAGGGTGCCCAAAGCTTGGGCCCCGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38784.p1 GENE.S_Transcript_38784~~S_Transcript_38784.p1 ORF type:5prime_partial len:228 (+),score=54.63,Pep_deformylase|PF01327.17|3.3e-48 S_Transcript_38784:3-686(+)
HPTIRNFRSSASPKWTTKAGWLLGLGEKKQQLPDLVKAGDPILHEPAQEVDPKDIGSERIQKIIDDMVKVMRKPPGVGLAAPQIGIPLRIIVLEDTKEYISYGPKEEIKAQDRRPFDLLLLDMRQVIVNPKLKKKSNRTALFFEGCLSVDGYRAVVERNLDVQVTGLDRYGQPITVDASGWQARILQHECDHLEGTLYVDKMLPKTFRTVENRDLPLAAGCPKLGPR*

Click here to download the sequence:
Link to NCBI Protein BLAST