Transcript Information: S_Transcript_38786.p1


Annotated TAIR IDAT1G15390.1
Annotated Gene Namepeptide deformylase 1A
Annotated Gene Symbol(s)PDF1A, ATDEF1
Annotation TypeOrtholog
Chromosome Positionchr1:5294653-5295625 | Forward length=269
E-Value2.3E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9099670061166
Replicate 25.5418381352999
Replicate 34.8073482682371
Condition 2: 8 Hour
Replicate 14.9523418272015
Replicate 25.0893304962411
Replicate 35.9603554914403
Condition 3: 24 Hour
Replicate 13.8306193798672
Replicate 24.9409257465023
Replicate 33.1079296423366


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38786.p1 GENE.S_Transcript_38786~~S_Transcript_38786.p1 ORF type:internal len:211 (+),score=39.46,Pep_deformylase|PF01327.17|1.1e-16 S_Transcript_38786:1-630(+)
ATTTGCTGGGCTCTTATCAGTCTCACAAAACAACTATCATCATCAATTCATCATCATCTTCCTGTCTATGGTTTCTTTCCTCCAATATTCCTCCCAAGCCATTCAAAAATGGAGCCTTTACCTTGCCTATCTCAGCACTTCCTTTCACTCTCACCCCCAAGAGCCAATCTCAAATTCTTCCTAACCCCAGTTCTCCATCTCCAAGCTCCCCAACAACCCAATTCAAAACCCGGACTCATCTGCCCAAACCCACTTAAAACCTCCCATGTTCTCCATCCTACAATAAGAAACTTCAGGTCCTCTGCCTCACCCAAATGGACTACCAAAGCAGGATGGTTACTGGGTCTTGGAGAAAAGAAACAACAATTGCCTGATTTGGTGAAAGCAGGTGACCCGATTCTTCATGAACCAGCTCAAGAAGTTGACCCGAAAGATATCGGGTCAGAGAGGATTCAAAAGATAATTGATGATATGGTTAAGGTTATGAGGAAGCCTCCTGGGGTTGGCCTTGCTGCTCCTCAAATTGGTATCCCTTTAAGGATTATTGTATTGGAGGATACTAAAGAGTACATCAGTTATGGACCAAAAGAGGAGATCAAAGCACAGGACAGACGCCCCTTTGATCTTCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38786.p1 GENE.S_Transcript_38786~~S_Transcript_38786.p1 ORF type:internal len:211 (+),score=39.46,Pep_deformylase|PF01327.17|1.1e-16 S_Transcript_38786:1-630(+)
ICWALISLTKQLSSSIHHHLPVYGFFPPIFLPSHSKMEPLPCLSQHFLSLSPPRANLKFFLTPVLHLQAPQQPNSKPGLICPNPLKTSHVLHPTIRNFRSSASPKWTTKAGWLLGLGEKKQQLPDLVKAGDPILHEPAQEVDPKDIGSERIQKIIDDMVKVMRKPPGVGLAAPQIGIPLRIIVLEDTKEYISYGPKEEIKAQDRRPFDLL

Click here to download the sequence:
Link to NCBI Protein BLAST