Transcript Information: S_Transcript_38793.p1


Annotated TAIR IDAT1G15390.1
Annotated Gene Namepeptide deformylase 1A
Annotated Gene Symbol(s)PDF1A, ATDEF1
Annotation TypeOrtholog
Chromosome Positionchr1:5294653-5295625 | Forward length=269
E-Value9.4E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5642412368545
Replicate 24.2352676382729
Replicate 33.6226803021358
Condition 2: 8 Hour
Replicate 12.9512816956747
Replicate 24.1947216199487
Replicate 33.9015613919832
Condition 3: 24 Hour
Replicate 13.2182194428107
Replicate 24.6541755915713
Replicate 32.4771650755025


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38793.p1 GENE.S_Transcript_38793~~S_Transcript_38793.p1 ORF type:internal len:224 (-),score=44.69,Pep_deformylase|PF01327.17|9.7e-39 S_Transcript_38793:3-671(-)
CCCCCAAGAGCCAATCTCAAATTCTTCCTAACCCCAGTTCTCCATCTCCAAGCTCCCCAACAACCCAATTCAAAACCCGGACTCATCTGCCCAAACCCACTTAAAACCTCCCATGTTCTCCATCCTACAATAAGAAACTTCAGGTTCTCTGCCTCACCCAAATGGACTACCAAAGCAGGATGGTTACTGGGTCTTGGAGAAAAGAAACAACAATTGCCTGATTTGGTGAAAGCAGGTGACCCGATTCTTCATGAACCAGCTCAAGTAGTTGACCCGAAAGAAATCGGGTCAGAGAGGATTCAAAAGATAATTGATGATATGGTTAAGGTTATGAGGAAGCCTCCTGGGGTTGGCCTTGCTGCTCCTCAAATTGGTATCCCTTTAAGGATTATTGTATTGGAGGATACTAAAGAGTACATCAGTTATGGACCAAAAGAGGAGATCAAAGCACAGGACAGACGCCCCTTTGATCTTCTGGTCATCGTGAATCCAAAACTCAAAAAGAAGAGCAACAGAACGCTATTCTTTGAAGGCTGCCTGAGTGTTGATGGTTACAGAGCAGTTGTGGAGCGAAACCTTGATGTTCAGGTCACAGGACTGGACCTATATGGACAGCCTATTACGGTGGATGCTTCAGGATGGCAGGCACGCATTCTCCAGCATGAGTGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38793.p1 GENE.S_Transcript_38793~~S_Transcript_38793.p1 ORF type:internal len:224 (-),score=44.69,Pep_deformylase|PF01327.17|9.7e-39 S_Transcript_38793:3-671(-)
PPRANLKFFLTPVLHLQAPQQPNSKPGLICPNPLKTSHVLHPTIRNFRFSASPKWTTKAGWLLGLGEKKQQLPDLVKAGDPILHEPAQVVDPKEIGSERIQKIIDDMVKVMRKPPGVGLAAPQIGIPLRIIVLEDTKEYISYGPKEEIKAQDRRPFDLLVIVNPKLKKKSNRTLFFEGCLSVDGYRAVVERNLDVQVTGLDLYGQPITVDASGWQARILQHEC

Click here to download the sequence:
Link to NCBI Protein BLAST