Transcript Information: S_Transcript_38798.p3


Annotated TAIR IDAT5G59140.1
Annotated Gene NameBTB/POZ domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23874696-23875631 | Reverse length=96
E-Value4E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 150.877796479021
Replicate 254.832521106177
Replicate 346.920490330337
Condition 2: 8 Hour
Replicate 152.059041068295
Replicate 254.942628276976
Replicate 353.446353186019
Condition 3: 24 Hour
Replicate 151.399725860222
Replicate 252.16009576027
Replicate 350.258632601371


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38798.p3 GENE.S_Transcript_38798~~S_Transcript_38798.p3 ORF type:5prime_partial len:136 (+),score=15.82,Skp1_POZ|PF03931.11|2.9e-08 S_Transcript_38798:2-409(+)
CAGCACGAGTCCATGACTGACCAACGACTAAACCGTTTTCGATCGTCTAGTTCGTTGGTTGCGGAAGCAAGCAAATTCGAGAGAGAGAGAGAGAGAGGGGGAGGCGCGAAGATGAAGAAAGAGGAGACAGTGAAACTGATCAGCGCTGAAGGCTTTGAGTTCGTCATCGATAAGAAAGCTGCTATGGTTTCTCAAACCCTCCGCAACATGCTTACTTCTCCAGGTAGTTTTGCTGAAACGCAGCACGGAGAAGTTAGGTTTCCTGAAATTAGCACTACTATTCTCGAGAAAATTTGCCAGTACTTCTATTGGTCTCTTCAATACGCCAGTGGGAAAGAGACCGAGTTTCACATTGAACCTGAACTTACTTTGGAGCTAATGATGGCTGCCAATTATCTCCACACGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38798.p3 GENE.S_Transcript_38798~~S_Transcript_38798.p3 ORF type:5prime_partial len:136 (+),score=15.82,Skp1_POZ|PF03931.11|2.9e-08 S_Transcript_38798:2-409(+)
QHESMTDQRLNRFRSSSSLVAEASKFERERERGGGAKMKKEETVKLISAEGFEFVIDKKAAMVSQTLRNMLTSPGSFAETQHGEVRFPEISTTILEKICQYFYWSLQYASGKETEFHIEPELTLELMMAANYLHT*

Click here to download the sequence:
Link to NCBI Protein BLAST