Transcript Information: S_Transcript_387980.p2


Annotated TAIR IDAT4G02800.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 3209 Blast hits to 2720 proteins in 308 species: Archae - 13; Bacteria - 213; Metazoa - 1207; Fungi - 247; Plants - 183; Viruses - 21; Other Eukaryotes - 1325 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:1250126-1251478 | Forward length=333
E-Value4E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.90213563509086
Replicate 20.1869727928603
Replicate 30.15629437358984
Condition 2: 8 Hour
Replicate 10
Replicate 20.3791838752496
Replicate 30.1806427763134
Condition 3: 24 Hour
Replicate 10
Replicate 20.57619859939866
Replicate 30.64123841707922


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_387980.p2 GENE.S_Transcript_387980~~S_Transcript_387980.p2 ORF type:5prime_partial len:118 (+),score=37.98 S_Transcript_387980:2-355(+)
TCACTGAATGATGACAGAGGGTCAAACCGTGCTAAGAGGATGAAGGAAGATTCCAAGCTTTTAATTAGAGGGTTTGATTCTGTTGCTTATTCACTATCTCAGCTTACAGGCACTCTGGAAAATGCCCTTCAGGGAGTACGAGATTTGGCTAAGCCACCAACATTAACGGAGATTGTCCAAAGGACCATGAGCAACACTGAGAAGGATGAAGATGACAAGCAAAAAGAAGAAGAATCGGACAAGGTTGAAGAAGGAAATAGAGGGGAAAGATACAGACTGAAGAAGATGACAAGCAAAAAGAAGAAGAATCGGACAAGGTTGAAGAAGGAAATAGAGGGGAAAGATACAGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_387980.p2 GENE.S_Transcript_387980~~S_Transcript_387980.p2 ORF type:5prime_partial len:118 (+),score=37.98 S_Transcript_387980:2-355(+)
SLNDDRGSNRAKRMKEDSKLLIRGFDSVAYSLSQLTGTLENALQGVRDLAKPPTLTEIVQRTMSNTEKDEDDKQKEEESDKVEEGNRGERYRLKKMTSKKKKNRTRLKKEIEGKDTD*

Click here to download the sequence:
Link to NCBI Protein BLAST