Transcript Information: S_Transcript_388079.p1


Annotated TAIR IDAT5G20400.1
Annotated Gene Name2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6894871-6896185 | Forward length=348
E-Value8.6E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.49283335620705
Replicate 20.40857017699101
Replicate 30.34153214969631
Condition 2: 8 Hour
Replicate 10
Replicate 20.62144023999241
Replicate 30.59210687791615
Condition 3: 24 Hour
Replicate 10.8090697589109
Replicate 20.2098501071884
Replicate 30.23353744819552


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_388079.p1 GENE.S_Transcript_388079~~S_Transcript_388079.p1 ORF type:5prime_partial len:108 (+),score=15.40,2OG-FeII_Oxy|PF03171.16|1.1e-15,2OG-FeII_Oxy|PF03171.16|2.7e+03 S_Transcript_388079:1-324(+)
GGCCTTCAGGTGCTCAAGGATGATAAGTGGTTCAGAGTTCCCATTATTCCGGATGCTTTATTTGTCAATGTTGGTGATATATTAGAGATAATGAGCAACGGTATATTGAAAAGTCCGGTTCATAGGGTTGTTACAAACTCAGAAAGCGAAAGGATCTCACTGGCGGTGTTCTGTTTCCCTGATCCTGAGAGGGAGATTGGACCGGTGGCTGGATTAATAACAGATGATCAGCCACAGGTGTACAAGCGAGTAAAGCATTACGAAAAGATATTCTTTGAGTATTACCAGCTAGGGCAGAGACCATTGCATGCTGTTAGATTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_388079.p1 GENE.S_Transcript_388079~~S_Transcript_388079.p1 ORF type:5prime_partial len:108 (+),score=15.40,2OG-FeII_Oxy|PF03171.16|1.1e-15,2OG-FeII_Oxy|PF03171.16|2.7e+03 S_Transcript_388079:1-324(+)
GLQVLKDDKWFRVPIIPDALFVNVGDILEIMSNGILKSPVHRVVTNSESERISLAVFCFPDPEREIGPVAGLITDDQPQVYKRVKHYEKIFFEYYQLGQRPLHAVRL*

Click here to download the sequence:
Link to NCBI Protein BLAST