Transcript Information: S_Transcript_388483.p1


Annotated TAIR IDAT5G53210.1
Annotated Gene Namebasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Annotated Gene Symbol(s)SPCH
Annotation TypeHomolog
Chromosome Positionchr5:21586606-21588941 | Reverse length=364
E-Value6E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.8015964227464
Replicate 20.39872511248521
Replicate 30
Condition 2: 8 Hour
Replicate 10.25693241345943
Replicate 20
Replicate 30.12840872051194
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_388483.p1 GENE.S_Transcript_388483~~S_Transcript_388483.p1 ORF type:5prime_partial len:166 (-),score=25.95 S_Transcript_388483:110-607(-)
GTAGTTAGCCCTAGAAAACCACCATTAAGTCCAAGGCTTAACTTACCTATAAGTCCAAGAACCCCTCAACCAAGTAGCCCTTATAATAGGCCAAGAATGAACCTCTCTCCATCAATAACTACTACTACTACTCCCATTGATCTCTCACCTTCTTCTTCAAGCTCTTCTCTTAATGATTCGGTCGCTAACGAGTTGATTGCTAATTCGAGCTCTCCAATGGCTGAGGTTGAAGTCAAGCTCTCTGGCCCTAATGTTCTTGTCAAGACAATATCGCCGCGAATTCCAGGACAAGTTGTGAAGATAATCTCTGCCCTTGAAGATTTATGCCTTGAGATTCTTCATATAAGCATTAGTACCATTGAAGAGACTATGCTTAACTCCTTTACCATCAAGGTAGAGCACATTGCTAAGATAGGAATTGAATGCCAGCTGAGTGCTGAGGAGCTTGCTCACCAAATCCAACAAACATTCTGCTCAACTCCACTTATTATCAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_388483.p1 GENE.S_Transcript_388483~~S_Transcript_388483.p1 ORF type:5prime_partial len:166 (-),score=25.95 S_Transcript_388483:110-607(-)
VVSPRKPPLSPRLNLPISPRTPQPSSPYNRPRMNLSPSITTTTTPIDLSPSSSSSSLNDSVANELIANSSSPMAEVEVKLSGPNVLVKTISPRIPGQVVKIISALEDLCLEILHISISTIEETMLNSFTIKVEHIAKIGIECQLSAEELAHQIQQTFCSTPLIIN*

Click here to download the sequence:
Link to NCBI Protein BLAST