Transcript Information: S_Transcript_388545.p1


Annotated TAIR IDAT5G49610.1
Annotated Gene NameF-box family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20131448-20132527 | Reverse length=359
E-Value0.0005
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16427778540235
Replicate 20.13619005899701
Replicate 30.22768809979754
Condition 2: 8 Hour
Replicate 10.65819105917077
Replicate 20.69048915554712
Replicate 30.39473791861077
Condition 3: 24 Hour
Replicate 10.60680231918317
Replicate 20.55960028583574
Replicate 30.38922908032587


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_388545.p1 GENE.S_Transcript_388545~~S_Transcript_388545.p1 ORF type:3prime_partial len:324 (+),score=46.14,F-box-like|PF12937.3|6.6e-10,F-box|PF00646.29|5.5e-07 S_Transcript_388545:717-1685(+)
ATGGATGAAGAAAGTGAAAGAAAAGCTACTAGTATAGAGAGGTTACCAGATGAATTGGTGTTAGAAATTCTGTCGAGACTTGGTAGGAGCAAGGATGTTTTCCGGTGCAAGGCAGTTTGTAAGCGTTGGTTGCGTGTGGGTTCGAATGATTTCTTCATCCATCGCTTCATCTCACAGCATACTGGCAAATATGGAAGTAGTAGATATGGACATGGAGCATCAAGTCGTACATGTTCTTCAGTTGTCCTTATATTGACACCTCGGAGTGAAGATTATCGTAAAGGCTTATTTATAACTCCTAGACATTCAAAATTTTCACCACCACCACCACCACCAAGTAACACTAGAGATATGCTCAACAACATTAGCAGCAAGAGCAAGAAGAAGTCAAAGCGTAAAGTATTCTCTAAGATATTTGGAGAGGATGAGGACATTGGATTATTGGCTGCATATAATGACTTGCTTCTTTGCTATGCAACAAGTTTCAGTAGTCGGGGTTACGAGCGGTCTGATGTCTACATTTGCAATCCCCAAACAAAGGACTGGCTGGTGCTCCCTCGACCCCCTGTCTCTGAGAGCAATTGGGTTGTAGCTGGCCTCTTGTGTACTAGTCTTATCAACGCAAGCTATCGATATTGTGTTGTCTGTCTCTTTGATAGGAGTTTAGAAGTTAAACATGATCAACCAAGGAAAAGGAAGAGGAGTAGTGGTAGATACTCTTATAACGCGCAGATGTTTGATTCAGAGTATAGAAGATGGCACATGGTTAATCTCGTGTGGTCATCCTCATCATTCTATCCATACTGGGATGGTGAATGTGGTAGCCTGGTGTATGATGGTATGCTATGGTTTTATGACCAACGTCCCAGTGACGGTGGTGGCATGATTGCTTTCGATCCCTTCCAGGATGACATTGCCAACAACAAAATCATCAGGTGCCAAACTATAGATTGGCCTAGTGATTGTCGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_388545.p1 GENE.S_Transcript_388545~~S_Transcript_388545.p1 ORF type:3prime_partial len:324 (+),score=46.14,F-box-like|PF12937.3|6.6e-10,F-box|PF00646.29|5.5e-07 S_Transcript_388545:717-1685(+)
MDEESERKATSIERLPDELVLEILSRLGRSKDVFRCKAVCKRWLRVGSNDFFIHRFISQHTGKYGSSRYGHGASSRTCSSVVLILTPRSEDYRKGLFITPRHSKFSPPPPPPSNTRDMLNNISSKSKKKSKRKVFSKIFGEDEDIGLLAAYNDLLLCYATSFSSRGYERSDVYICNPQTKDWLVLPRPPVSESNWVVAGLLCTSLINASYRYCVVCLFDRSLEVKHDQPRKRKRSSGRYSYNAQMFDSEYRRWHMVNLVWSSSSFYPYWDGECGSLVYDGMLWFYDQRPSDGGGMIAFDPFQDDIANNKIIRCQTIDWPSDCR

Click here to download the sequence:
Link to NCBI Protein BLAST