Transcript Information: S_Transcript_388802.p1


Annotated TAIR IDAT5G24620.1
Annotated Gene NamePathogenesis-related thaumatin superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8430918-8432289 | Forward length=420
E-Value9.7E-134
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61101278346078
Replicate 20.28141313211116
Replicate 30.18819118452654
Condition 2: 8 Hour
Replicate 10.21760602364421
Replicate 20.11414208489656
Replicate 30.27188581128803
Condition 3: 24 Hour
Replicate 10.22290697439382
Replicate 20.46252676686423
Replicate 30.19302585003915


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_388802.p1 GENE.S_Transcript_388802~~S_Transcript_388802.p1 ORF type:5prime_partial len:392 (+),score=38.72,Thaumatin|PF00314.13|2.6e-80 S_Transcript_388802:3-1178(+)
AGCCTTCCCCTCTATATTCCTCATACCATTTCCTCTTTAGACATCCAGAAACCAGCCCTCTATACTCTGAAAACTTTGACAATGCCAAACTTATCCTCCTTTATGCTTAATGGCTTCGCTACCGTCATCATATCTTTCCTGTTTCCCTACACAGTATCTTGCACATTTACCATAACCAACAACTGTCCATTTACCATATGGCCCGGGACATTATCAGGGTCTGGTACACCCCCACTTTCCACGACCGGGTTCCAGTTAGAGTCGGGGAAGAGTGTGAAAATAGATGCGGTTCCTGGATGGTCAGGAAGGATATGGGCACGGACAGGGTGCAAGTTTGATGAGAGCGGCATTGGCAAGTGCCAAACAGGGGACTGTGGGGGCAGGATGCAATGTGATGGGGCTGGAGCCACACCACCTGCATCCCTATTTGAAATAACGCTCGGCCAAGGCAATGACAAGGACTTCTATGATGTTAGCATTGTGGACGGATATAATCTGCCCATTGTTGCTTGGCCTGTTGGGGCTACTGCTGGCGCTGGTGTTGGCGGCTGCAATGCAACCGGCTGTGTCTCTGACATCAATATGGGGTGCCCCAAAGAGTTGCAGGTGGTGAGCGGAGATGGAGGAGGAGGTGGCGGAGTCATCGCATGTAAAAGTGCCTGCGAGGCATTTGGACTGGACCAATACTGTTGTAGCAAACAATTTGCCAACCCAACAACCTGCCGACCATCTTATTATTCGTATATCTTCAAGAGAGCCTGTCCGAGGGCATATAGCTATGCCTTTGATGATGGCACGAGCACATTCACTTGCAAGGCCTACAATTATGCCATCCTTTTCTGCCCTTCTTCAGCTGGCGGGACTAGGAAACCTAGGGGACCGACATACAGTCCACCACCAAGTGATATGTATAATTCATCACCAAGTGCAGGTTACAATTCACCCCCAAGTGACGGATACAATTCACCACCAAGTGGCAGTTACAATCCCCCACCAAGTTTTACTCATCCACCAGGAGGGGGATACAGTTCGCCTCCAAGCTTCATCTACAATTCACCACCATTCCAGAAACATAGTCATGGGGCAACTGAGGGGGAGACATCGTCCTCCTACACCATCTTACACCATCATGTATACATTCTTCTGATCTTTTTCAGTTTGCTGATGCTGAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_388802.p1 GENE.S_Transcript_388802~~S_Transcript_388802.p1 ORF type:5prime_partial len:392 (+),score=38.72,Thaumatin|PF00314.13|2.6e-80 S_Transcript_388802:3-1178(+)
SLPLYIPHTISSLDIQKPALYTLKTLTMPNLSSFMLNGFATVIISFLFPYTVSCTFTITNNCPFTIWPGTLSGSGTPPLSTTGFQLESGKSVKIDAVPGWSGRIWARTGCKFDESGIGKCQTGDCGGRMQCDGAGATPPASLFEITLGQGNDKDFYDVSIVDGYNLPIVAWPVGATAGAGVGGCNATGCVSDINMGCPKELQVVSGDGGGGGGVIACKSACEAFGLDQYCCSKQFANPTTCRPSYYSYIFKRACPRAYSYAFDDGTSTFTCKAYNYAILFCPSSAGGTRKPRGPTYSPPPSDMYNSSPSAGYNSPPSDGYNSPPSGSYNPPPSFTHPPGGGYSSPPSFIYNSPPFQKHSHGATEGETSSSYTILHHHVYILLIFFSLLMLS*

Click here to download the sequence:
Link to NCBI Protein BLAST