Transcript Information: S_Transcript_388870.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21724898967494
Replicate 20.54031321365342
Replicate 30.30110589524246
Condition 2: 8 Hour
Replicate 10.087042409457686
Replicate 20.091313667917252
Replicate 30.26101037883651
Condition 3: 24 Hour
Replicate 10.089162789757527
Replicate 20.37002141349139
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_388870.p2 GENE.S_Transcript_388870~~S_Transcript_388870.p2 ORF type:complete len:245 (+),score=34.18,RVT_1|PF00078.23|7.7e-38 S_Transcript_388870:3023-3757(+)
ATGTACTGTACAGTGTTATCCAAGTTGTTGACTGAGAAACTTAAACTGGTAGTGGAGGGGCTGGTGGGACAGGAACAAGCAGCTTTCATAGCTAGAAGATCAATTCATAATAATATCTTATCATCTCACAATTTGGTTCATTCCTATGGTAGAAAGCATATTTTACCTAGGGCTATGGTAAAGATTGATATCAAGAAAGCCTATGATAGTGTCTCTTGGAAGTTCATTAAGGCTATGCTATCATATTATGAGTTCCCGGGAATTTTTTTGGATAGGGTGATGACTTGCTTATCTACAACTCAGTTTTCTGTCAATATAAATGGAGAGTTGAAAGGGTTCTTCAAGGGGGAAGGTGGATTAAGGCAAGGTGACCCCATGTCCCCTTACCTGTTTGTTCTGTGTATGGAAATTCTTTCGAGGATGCTAAGGAATGGTTTTAGGAATCCAGATTTGAAACCTCACCCTAAATGCTCCAGGATGAAGCTCAACCACCTTATCTTTGCGGATGAATTGCTGCTTTTCACCAAAGGAGAGAAAAAATCAATCATAAGTATGCTTGCCATAATAAATGACTTCTCTGGAATCTCAGGCCTCTGTGCTAATGAAACCAAAAGCTTCATCTACTTTGGGGGGCTTAGCCAAGAGGAGAAGGGAGATATGCTGGCCTGTACAGGGTATTCTGAGGGATGTCTTCCTTTTAGATACCTTGGAGTTCCTTGTCAGCCACTAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_388870.p2 GENE.S_Transcript_388870~~S_Transcript_388870.p2 ORF type:complete len:245 (+),score=34.18,RVT_1|PF00078.23|7.7e-38 S_Transcript_388870:3023-3757(+)
MYCTVLSKLLTEKLKLVVEGLVGQEQAAFIARRSIHNNILSSHNLVHSYGRKHILPRAMVKIDIKKAYDSVSWKFIKAMLSYYEFPGIFLDRVMTCLSTTQFSVNINGELKGFFKGEGGLRQGDPMSPYLFVLCMEILSRMLRNGFRNPDLKPHPKCSRMKLNHLIFADELLLFTKGEKKSIISMLAIINDFSGISGLCANETKSFIYFGGLSQEEKGDMLACTGYSEGCLPFRYLGVPCQPLI*

Click here to download the sequence:
Link to NCBI Protein BLAST