Transcript Information: S_Transcript_388870.p7


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1570870102252
Replicate 20.57555103193517
Replicate 30.80185809059133
Condition 2: 8 Hour
Replicate 10.37087635334144
Replicate 20.19453781425849
Replicate 30.74142078626022
Condition 3: 24 Hour
Replicate 10.18995550861386
Replicate 20.9853831120151
Replicate 30.87728850104752


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_388870.p7 GENE.S_Transcript_388870~~S_Transcript_388870.p7 ORF type:complete len:115 (+),score=23.54,zf-RVT|PF13966.2|8.1e-16 S_Transcript_388870:4240-4584(+)
ATGGGCAGTATTGAAGCAAGCAAGAAGGCTTTGTTGGATTGGGGGCAGAAGGGGAGATTCAACATTGGGAGTGCATATAATTTTTTGAGGAGGGAAGGCAGGAAACATCAATGGTGCACTCTTAACTGGTCCTCTTGTGCCAGACCTAGAGCTCAAGTGATAGCATGGATGGCTTTCCATGGGAGGTTGAAGACCAGGAGCTTTCTGAAGGGTAGAAAGATTATTGATGAAGATCAATGTGGCATGCGCCAGCAAGGAAGTGAAAATTGCTCACACCTGTTCTTTCTATATCAGGAAACAAAAGTGATTTGGCAGGAAATGTGTGAATGGTCTCGGATTGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_388870.p7 GENE.S_Transcript_388870~~S_Transcript_388870.p7 ORF type:complete len:115 (+),score=23.54,zf-RVT|PF13966.2|8.1e-16 S_Transcript_388870:4240-4584(+)
MGSIEASKKALLDWGQKGRFNIGSAYNFLRREGRKHQWCTLNWSSCARPRAQVIAWMAFHGRLKTRSFLKGRKIIDEDQCGMRQQGSENCSHLFFLYQETKVIWQEMCEWSRIG*

Click here to download the sequence:
Link to NCBI Protein BLAST