Transcript Information: S_Transcript_388934.p1


Annotated TAIR IDAT5G55690.1
Annotated Gene NameMADS-box transcription factor family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22548790-22549623 | Reverse length=277
E-Value6E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1405571957934
Replicate 21.1819351548669
Replicate 30.79040297501145
Condition 2: 8 Hour
Replicate 11.9802148151623
Replicate 22.4768832422554
Replicate 32.588352923462
Condition 3: 24 Hour
Replicate 10.70215696934053
Replicate 20.89036402621365
Replicate 30.90078730018272


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_388934.p1 GENE.S_Transcript_388934~~S_Transcript_388934.p1 ORF type:5prime_partial len:280 (+),score=60.91,SRF-TF|PF00319.14|2e-17,SRF-TF|PF00319.14|3.6e+03 S_Transcript_388934:1-840(+)
CAACCAAAAACACCAGCAGCAACACAACTTCCCAAACCCAATTTTGGAAATACAAGAAATAAGATGGGTAGAAAGAAAATAGAGATGGGAAAAATAGAGAACAAGAGAACATTGATGAGGACATTCAACAACAGAAAACAAGGGCTTATGAAGAAGGCTGGTGAGCTTTCGAAGCTTTGTGATGTCGAAACTTGTGTCATAATTTTTGGACCAAATGGAGATCATGCCCCTCATGTTTGGCCGAAGGAACCCCAGAAGCTTAACAACTCGATTTTGAGGTATCAGAACACCAGCATAGAGGAACGCCGCAAAAGAGCTACTAATCTCTCCACTTTCATCCACTCAACCAACATGATTAGTCCGTCCCCAAATGAACATCTTGTTAAAGTAACAATGCCCGAGAAACAGACTTGGGATCCTCGGATTGACAGTTTTTCGGTTGATCAGTTGGTGGCCTTGGTGAATTGCTTGGACTCCAAGCTTGAAATCGTCAAGGACAGAATTGGAATGATGAAGATGAGAAGTGCTTATGATCAATTTCAGGGGATTCAAGAGCATGAAGAAGAAGAAAAGATTAATGCAATGCCGATGATGAATATGACAGATGATCAAATGGGTTTGCCTAACTTGGGTTCATATGATCAATATCATCAGCAGCAGCAGCTTTCGGCAGGGTTGAATTTGATGATGGTTAATGGTGGTTACATGAACCCCATGAATGTTGATATGAGTTTACTGGGAATGGGGATTATGCAGGGGCCATCCCATCCGACTCCGGTGACTTGGTACTATGATCCTTCTCAGTTGCAAGCTTCTCAAGCAGTTCATCTCCCTTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_388934.p1 GENE.S_Transcript_388934~~S_Transcript_388934.p1 ORF type:5prime_partial len:280 (+),score=60.91,SRF-TF|PF00319.14|2e-17,SRF-TF|PF00319.14|3.6e+03 S_Transcript_388934:1-840(+)
QPKTPAATQLPKPNFGNTRNKMGRKKIEMGKIENKRTLMRTFNNRKQGLMKKAGELSKLCDVETCVIIFGPNGDHAPHVWPKEPQKLNNSILRYQNTSIEERRKRATNLSTFIHSTNMISPSPNEHLVKVTMPEKQTWDPRIDSFSVDQLVALVNCLDSKLEIVKDRIGMMKMRSAYDQFQGIQEHEEEEKINAMPMMNMTDDQMGLPNLGSYDQYHQQQQLSAGLNLMMVNGGYMNPMNVDMSLLGMGIMQGPSHPTPVTWYYDPSQLQASQAVHLPF*

Click here to download the sequence:
Link to NCBI Protein BLAST