Transcript Information: S_Transcript_389105.p2


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value6E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.40527413048498
Replicate 20.1119938556219
Replicate 30.37447179865179
Condition 2: 8 Hour
Replicate 10.75775498588797
Replicate 20.34068805035117
Replicate 30.1082022721065
Condition 3: 24 Hour
Replicate 10.66532640072876
Replicate 20.46017891525578
Replicate 30.12803068225947


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_389105.p2 GENE.S_Transcript_389105~~S_Transcript_389105.p2 ORF type:complete len:197 (+),score=25.24,RVT_1|PF00078.23|2.7e-13 S_Transcript_389105:962-1552(+)
ATGTCCCCTTACCTTTTTGTGTTATGTATGGAGATTTTGTCCAGGATGCTGAGAGGATGTTTTGAGAAGAGTGGTTTCAAAGCTCACCCCAAGTGTGTTAAGATGAAGCTGAATCATCTGGTGTTTGTAGATGATCTGTTGTTATTCTCAAAAGGGGATGCTGAGTCAATTCTGGTGATGCTGGAAACATTTGAGAAATTTTCAAATATGTCTGGACTCAAAGCTAATAAGACTAATAGTAGTATATACTTTGGAGGCGTCACAGATGTACAAAAATCTATTATTTTGCAAGGGAAACTTCCATTCAGATACTTGGGAGTGCCACTTTCAGCTACCTGTCTGACCAGGAGTCATTATAGGCCACTGATTGAAGGAGTGTCCAGAAAGATCAAACACTGGGCAAATTTACTACTGAGCTATGCTGGGAGACTACAACTGCTGAAGTCAGTGGTGGTATCTTCCTTGGTTTACTGGTGTTCAGTCTTTCTGTTGCCTAAACAAGTTATATATGAGATTCAACAATTGTGTAGAAGATTTCTTTGGGGGGCATCTGGAGAAGAAAAAGGCTTTTGCACCCATAAAGTGGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_389105.p2 GENE.S_Transcript_389105~~S_Transcript_389105.p2 ORF type:complete len:197 (+),score=25.24,RVT_1|PF00078.23|2.7e-13 S_Transcript_389105:962-1552(+)
MSPYLFVLCMEILSRMLRGCFEKSGFKAHPKCVKMKLNHLVFVDDLLLFSKGDAESILVMLETFEKFSNMSGLKANKTNSSIYFGGVTDVQKSIILQGKLPFRYLGVPLSATCLTRSHYRPLIEGVSRKIKHWANLLLSYAGRLQLLKSVVVSSLVYWCSVFLLPKQVIYEIQQLCRRFLWGASGEEKGFCTHKVD*

Click here to download the sequence:
Link to NCBI Protein BLAST