Transcript Information: S_Transcript_389458.p1


Annotated TAIR IDAT5G46880.1
Annotated Gene Namehomeobox-7
Annotated Gene Symbol(s)HB-7, HDG5
Annotation TypeHomolog
Chromosome Positionchr5:19031540-19035388 | Forward length=826
E-Value5E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7156123709368
Replicate 21.688478792667
Replicate 31.3173382916857
Condition 2: 8 Hour
Replicate 11.5232421655095
Replicate 20.57071042448282
Replicate 30.87003459612169
Condition 3: 24 Hour
Replicate 11.225988359166
Replicate 20.92505353372846
Replicate 31.0294712002088


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_389458.p1 GENE.S_Transcript_389458~~S_Transcript_389458.p1 ORF type:5prime_partial len:196 (+),score=23.83 S_Transcript_389458:2-589(+)
CGAAGATCTCAGCTTGAAGCTCTATCGAATGGAAGTTCATTGCATGAATTGGCTCATATTGCTAATGGTTCTCATCCAGGGAACTGCATTTCTCTTCTTCGCATCAACGTGGCAAGCAATTCCTCCCAAAATTTGGAACTAATGTTGCAGGAGAGTTGCACGGATGCATCAGGCAGCCTGATAGTGTACACTACAATGGAAGTTGACTACATCCAGCTAGTGATGAGCGGCGAGGATCCGTCCTGCATTCCTCTACTCCCAGTTGGATTCTCCATAATACCCCTCGGACCGACCAACAGAACGTCGAATCCAGGCAGGGCCACTAACGTGGAGGACCAAGGGCCCAACAACACCCAGGCTACAACTACTACAACAACAAGTGGGTGCCTTCTGACAGTAGGGCTACAGGTCCATGCCAGTACAATCCCAAATGCTAAGTTGAACCTCTCTAGTGTGACAGCAATTAATCACCACATCTGTAGTGTGGTCCACCAAATTAATGCTACCCTTAATGGTAGCACCAGTGCAAGCACTACCACTAATGCTAATAATAATGGTAGTGCTTGCCCTGCTGCTACCAGTAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_389458.p1 GENE.S_Transcript_389458~~S_Transcript_389458.p1 ORF type:5prime_partial len:196 (+),score=23.83 S_Transcript_389458:2-589(+)
RRSQLEALSNGSSLHELAHIANGSHPGNCISLLRINVASNSSQNLELMLQESCTDASGSLIVYTTMEVDYIQLVMSGEDPSCIPLLPVGFSIIPLGPTNRTSNPGRATNVEDQGPNNTQATTTTTTSGCLLTVGLQVHASTIPNAKLNLSSVTAINHHICSVVHQINATLNGSTSASTTTNANNNGSACPAATSS*

Click here to download the sequence:
Link to NCBI Protein BLAST