Transcript Information: S_Transcript_389821.p3


Annotated TAIR IDAT4G10340.1
Annotated Gene Namelight harvesting complex of photosystem II 5
Annotated Gene Symbol(s)LHCB5
Annotation TypeOrtholog
Chromosome Positionchr4:6408200-6409496 | Forward length=280
E-Value5.8E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.24233398087651
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.24823731239312
Replicate 20.51508662673517
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_389821.p3 GENE.S_Transcript_389821~~S_Transcript_389821.p3 ORF type:5prime_partial len:88 (+),score=5.41,Chloroa_b-bind|PF00504.17|3.2e-16 S_Transcript_389821:3-266(+)
CTGGATCTGGAGGACAAGCTCCACCCAGGTGGCCCATTCGACCCGCTGGGGCTGGCGAGCGACCCGGACCAGGCGGCGCTGCTGAAGGTGAAGGAGATCAAGAACGGGCGGCTGGCCATGTTCTCCATGCTGGGGTTCTTCATCCAGGCCTACGTCACCGGCGAGGGCCCCGTCGAGAACCTCTCCAAGCACCTCAGCGACCCCTTCGGCAACAACCTGCTCACCGTCATCTCCGGCGCCGCCGAGAGGACGCCCAGCCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_389821.p3 GENE.S_Transcript_389821~~S_Transcript_389821.p3 ORF type:5prime_partial len:88 (+),score=5.41,Chloroa_b-bind|PF00504.17|3.2e-16 S_Transcript_389821:3-266(+)
LDLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGPVENLSKHLSDPFGNNLLTVISGAAERTPSL*

Click here to download the sequence:
Link to NCBI Protein BLAST