Transcript Information: S_Transcript_389837.p1


Annotated TAIR IDAT1G12775.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4353906-4355840 | Forward length=644
E-Value3E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.37080318584059
Replicate 30.15498097549244
Condition 2: 8 Hour
Replicate 10.17920496064818
Replicate 20.75199491225972
Replicate 30.35824953957952
Condition 3: 24 Hour
Replicate 10.18357044950079
Replicate 20
Replicate 30.21194995298417


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_389837.p1 GENE.S_Transcript_389837~~S_Transcript_389837.p1 ORF type:3prime_partial len:119 (+),score=21.69,PPR_2|PF13041.2|8.7e-18,PPR_2|PF13041.2|8.3e-20,PPR_2|PF13041.2|1.1e-20,PPR_1|PF12854.3|6.8e-10,PPR_1|PF12854.3|8e-16,PPR_1|PF12854.3|2.5e-14,PPR_1|PF12854.3|1.7e-06,PPR|PF01535.16|2.2e-10,PPR|PF01535.16|2.7e-09,PPR|PF01535.16|1.1e-10,PPR|PF01535.16|2.4,PPR_3|PF13812.2|2.2e-06,PPR_3|PF13812.2|0.0001,PPR_3|PF13812.2|1.3e-09,PPR_3|PF13812.2|48,MRP-S27|PF10037.5|32,MRP-S27|PF10037.5|5.1e-06,ATP13|PF12921.3|1.9,ATP13|PF12921.3|0.2,ATP13|PF12921.3|12 S_Transcript_389837:48-356(+)
ATGGATGAGGCGTTACAACTAATGGATTTCATGGTGGAAAAGGGCTGCCATCCTAATGTTGTGACTTTAAACTCCTTGATCAATGGATATTGCAAGGCTAAAAACGTTGATACAGCTCTCAAACTTTTCCAGAAAATGTCTCTTATGGGACTAACACCTGATTTGTATACGTACAACACTCTCATTGATGGCTTGTCCAAGAATAATCGACTTGAATCTGCTTTCCAACTTTTCGAGGAAATGAAAGCTCATGGACTACATCCAGATGCTGTCACATATGCTTCGTTGCTTGATGGTCTTTGTAAAAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_389837.p1 GENE.S_Transcript_389837~~S_Transcript_389837.p1 ORF type:3prime_partial len:119 (+),score=21.69,PPR_2|PF13041.2|8.7e-18,PPR_2|PF13041.2|8.3e-20,PPR_2|PF13041.2|1.1e-20,PPR_1|PF12854.3|6.8e-10,PPR_1|PF12854.3|8e-16,PPR_1|PF12854.3|2.5e-14,PPR_1|PF12854.3|1.7e-06,PPR|PF01535.16|2.2e-10,PPR|PF01535.16|2.7e-09,PPR|PF01535.16|1.1e-10,PPR|PF01535.16|2.4,PPR_3|PF13812.2|2.2e-06,PPR_3|PF13812.2|0.0001,PPR_3|PF13812.2|1.3e-09,PPR_3|PF13812.2|48,MRP-S27|PF10037.5|32,MRP-S27|PF10037.5|5.1e-06,ATP13|PF12921.3|1.9,ATP13|PF12921.3|0.2,ATP13|PF12921.3|12 S_Transcript_389837:48-356(+)
MDEALQLMDFMVEKGCHPNVVTLNSLINGYCKAKNVDTALKLFQKMSLMGLTPDLYTYNTLIDGLSKNNRLESAFQLFEEMKAHGLHPDAVTYASLLDGLCKN

Click here to download the sequence:
Link to NCBI Protein BLAST