Transcript Information: S_Transcript_389954.p1


Annotated TAIR IDAT2G19710.1
Annotated Gene NameRegulator of Vps4 activity in the MVB pathway protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:8506339-8509817 | Forward length=937
E-Value2E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7042808672776
Replicate 22.0106483094287
Replicate 32.7255275000395
Condition 2: 8 Hour
Replicate 12.4161772280496
Replicate 22.2592260941596
Replicate 31.732568894001
Condition 3: 24 Hour
Replicate 12.098400138259
Replicate 22.0654212520317
Replicate 31.6152048141207


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_389954.p1 GENE.S_Transcript_389954~~S_Transcript_389954.p1 ORF type:5prime_partial len:406 (-),score=87.27 S_Transcript_389954:612-1829(-)
GAATGCATCTTGGATGCTCCACTGAAGTCACATGATTCTCCTTCACCTGGTAAATCTTCTGCCAACCAATTCGCCTTTCCCCAAAAGAATTCCCCTAGAAATTTGGCCAGCCAATCATCTTTTTCCTCTCATTCTCATCATGGACTTGATATTTCTGAAAGTTTCCGAGAATCCCCCATCTACTCAAAATTAATTGAGCCACTGCCAGTATCTTATGATTCAGATGGGGCAAGTTCTGGGACTGAGACAGAGCTCCCTCATGAGAAAACTGGTCCAGTAATTCAGAGCAATGATTATAGGGAGCCTGAAACCAACCCTGTATCGAATAATGAGCCTCAGAAATCACAAGATCCTGCTTCACAGTTTCAGCATGAAAGCCCACCTAGTCCAGAAGATGTTATGGCATTGAACTTTGGAATGTTGCCTACTGGCCGACGGAATAGGTCCAACTGGCGCCCGCCATACGTGAGAGGCACATTGAGTGCTGATTCATCTTCTGAAACGTATTCCAAGGCGGCTGTAGACGATGCTGTTGGTGCCAGTCAAGAAACTTCTTCCGTTCTCAACTACCAAGTTTCGTCCAAGGAAATGAAGAAAACAGTTCCTAGGGAGACGAGTGAGCCTCATGCACGTATCAACTCGACGAATGATGATGAGGTGGTTTTTCTACCTAAAGGTTCAGACACTCGTCAAATGCCATATACTGCAATAACTCATGAGTTTGTGCATACAACAAGATCAAAAGATCCAACAGGATCTTTTGATCCTGAAGAGGATGCCCCCAAACGACCTGTAATTCGCAAAACACCTCTAGGTGCTGGACTTTCTCGGAGAACTAAGGTTTCGAATCCAAGATTAGTCGCACGAACTCAGCCATCTATCATGACAGATAATGTTGGTGAGGCAGAACGTCCTTCAAGTTCAGATGCTACTCAAGTTTTTCCCAAACTGCAGGCTGATTACACAGGCTTCGGGTCAACTTCTAGGCCAAGGCCACAAACAAAAGCTTGGAAGGAGAATGAGAGCTTATCTTCCTCAGATGTGGAAGAAGTAACTAGTCCTGCAAGACGGACAGAGATACCAAGAGCATCAAATTCAATTGACAAGGCTCCTTCAAGAGAAAACTCTACCAAAACTCAAAGTCATGTTCATCCCAAGCTGCCAGATTTTGAAACGTTAACAGCCCAATTGCAGTCTTTACGCACAAATCGTCGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_389954.p1 GENE.S_Transcript_389954~~S_Transcript_389954.p1 ORF type:5prime_partial len:406 (-),score=87.27 S_Transcript_389954:612-1829(-)
ECILDAPLKSHDSPSPGKSSANQFAFPQKNSPRNLASQSSFSSHSHHGLDISESFRESPIYSKLIEPLPVSYDSDGASSGTETELPHEKTGPVIQSNDYREPETNPVSNNEPQKSQDPASQFQHESPPSPEDVMALNFGMLPTGRRNRSNWRPPYVRGTLSADSSSETYSKAAVDDAVGASQETSSVLNYQVSSKEMKKTVPRETSEPHARINSTNDDEVVFLPKGSDTRQMPYTAITHEFVHTTRSKDPTGSFDPEEDAPKRPVIRKTPLGAGLSRRTKVSNPRLVARTQPSIMTDNVGEAERPSSSDATQVFPKLQADYTGFGSTSRPRPQTKAWKENESLSSSDVEEVTSPARRTEIPRASNSIDKAPSRENSTKTQSHVHPKLPDFETLTAQLQSLRTNRR*

Click here to download the sequence:
Link to NCBI Protein BLAST