Transcript Information: S_Transcript_390175.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value6E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.67374686671343
Replicate 20.67026196124096
Replicate 30.74704753756357
Condition 2: 8 Hour
Replicate 10.48589496925113
Replicate 20.45310073194383
Replicate 30.21585668460741
Condition 3: 24 Hour
Replicate 10.4977315225705
Replicate 20.22950695267187
Replicate 30.51082621579982


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_390175.p1 GENE.S_Transcript_390175~~S_Transcript_390175.p1 ORF type:5prime_partial len:395 (+),score=49.23,zf-RVT|PF13966.2|1.2e-19,zf-RVT|PF13966.2|1.1e+04,zf-RVT|PF13966.2|1.6e+04,RVT_3|PF13456.2|9.3e-17 S_Transcript_390175:3-1187(+)
TTTTCTGACCTACTCCCTCAAGGGATTATCAAGTCTCTGATCCCAATATCTCTAGTACAAGGAGAAGAGGATGTCCTCTATTGGGGTGGTTCAAAGGAGGGGAAATTCACTCTTAAATCTGCTCTTAAGATGGTTCGCGATATACCTGATGTACAACACAACAAGGCCTGGGATCTCATCTGGAGGGTACCGGTTTCCCACCGAGTCAGAATGTTTCTTTGGTTAGTGATGCATCAGCGTTTACTCACCAATGCGAACAGGGTTTCGCGTGGCTTGGCGGAGGATCCCAGATGTTTGTGCTGTGGGGCCAATGAGGAGACAATCGACCATGTTTTGAGGACCTGCCTTTATGCCATGGCGGTTTGGGAACGCCTCAGCAATGGCACTATCCCAGCGCGGTTTTGGACTCAACCGGTTGATGAGTGGTTGGTCGATAATGTTAATATATATGATGCTGCCCTAGAGGAGGATGCACCGACGTGGTTTGCTATCACGTTATGGTGGATATGGCGTTGGCGTAATTGCCGAGTGTTTGGTCGGGAAAATGAAGTTCCTCAAGACCCTCTTCTGTTCCTTAAAGCTAGAATGACAGAGACAAAGAAGGCTATGAGTTTTGATGAAACTTTTTTTGGCCGCACCCTACCTAGGAGACAAGAAATTCTAATCAGTTGGCAATCACCCCCTGATGGATGGATTATGCTAAATACTGATGGTGCAAGTAAGGGAAACCCGGGCCTAGCTGGGGGAGGGGGAATTTTTCAAGACTCTCGAGGGGCTTTTGTAGCGGCCTTGTCGGAGAACTATGGAATTACCACTGTGACTATTGCTAAATTATTAGCTCTCCACAGAGGTCTGTTGTTAGCCAAGAAGCTCGGAATAAGAAGACTGCAGATATGTGTAGATTCGCAAGTGGTTGTTCACAGTATCGAACGCACTAACTCAAGGGCTGGACCTGGTCTGCATATCATAAACCAATGCAGGGCAGCAATTCTACAGGAGGGATGGGAAGTTGACATTAAACACTGTTATCGAGAGGCTAATCGGGCTGCGGATTGGTTAGCAAATATGGGGGTTGCCCAGGAGGTGAGGGTTCAGGAGCTTCAAGTTGTGCCCCAGGATCTGCAGAATAGTCTAGGAGAAGATGTGAGAGGTGTAGCTATTGCACGCTATATCCCTGTGCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_390175.p1 GENE.S_Transcript_390175~~S_Transcript_390175.p1 ORF type:5prime_partial len:395 (+),score=49.23,zf-RVT|PF13966.2|1.2e-19,zf-RVT|PF13966.2|1.1e+04,zf-RVT|PF13966.2|1.6e+04,RVT_3|PF13456.2|9.3e-17 S_Transcript_390175:3-1187(+)
FSDLLPQGIIKSLIPISLVQGEEDVLYWGGSKEGKFTLKSALKMVRDIPDVQHNKAWDLIWRVPVSHRVRMFLWLVMHQRLLTNANRVSRGLAEDPRCLCCGANEETIDHVLRTCLYAMAVWERLSNGTIPARFWTQPVDEWLVDNVNIYDAALEEDAPTWFAITLWWIWRWRNCRVFGRENEVPQDPLLFLKARMTETKKAMSFDETFFGRTLPRRQEILISWQSPPDGWIMLNTDGASKGNPGLAGGGGIFQDSRGAFVAALSENYGITTVTIAKLLALHRGLLLAKKLGIRRLQICVDSQVVVHSIERTNSRAGPGLHIINQCRAAILQEGWEVDIKHCYREANRAADWLANMGVAQEVRVQELQVVPQDLQNSLGEDVRGVAIARYIPVQ*

Click here to download the sequence:
Link to NCBI Protein BLAST