Transcript Information: S_Transcript_39027.p1


Annotated TAIR IDAT5G15270.2
Annotated Gene NameRNA-binding KH domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4958738-4960947 | Forward length=548
E-Value7.7E-231
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 182.178608209733
Replicate 285.624635663688
Replicate 386.842993536515
Condition 2: 8 Hour
Replicate 194.323841787319
Replicate 297.313444174635
Replicate 396.819234542772
Condition 3: 24 Hour
Replicate 181.938317561789
Replicate 275.130950463716
Replicate 373.541199071327


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39027.p1 GENE.S_Transcript_39027~~S_Transcript_39027.p1 ORF type:complete len:546 (+),score=121.66,KH_1|PF00013.25|2.6e-11,KH_1|PF00013.25|8.9e-15,KH_1|PF00013.25|4e-11,KH_1|PF00013.25|1.5e-13,KH_3|PF13014.2|2.9e-08,KH_3|PF13014.2|4.1e-10,KH_3|PF13014.2|1.3e-08,KH_3|PF13014.2|4.7e-08,KH_2|PF07650.13|0.15,KH_2|PF07650.13|0.0013,KH_2|PF07650.13|0.0011,KH_2|PF07650.13|0.36,KH_4|PF13083.2|3,KH_4|PF13083.2|0.0002,KH_4|PF13083.2|0.91,KH_4|PF13083.2|1.3,KH_5|PF13184.2|8.7,KH_5|PF13184.2|0.042,KH_5|PF13184.2|6.9,KH_5|PF13184.2|8.5e+03,KH_5|PF13184.2|12 S_Transcript_39027:385-2022(+)
ATGGCTGGTCACAGAAACAGTCATGGAAAGCGATCTCATTCGCAAGATCGTTCAGAAAACGGCGGTGGTGGTCATAGCAAGAGAAGAAACCCCGGTGAAGACCCGTTCAGTATTGGGCCGGAGGACACCGTTTACAGGTACCTATGCCCAGCCACTAAAATAGGCAGCATCATAGGCCGAGGGGGTGAGATTGTCAAACAGCTACGGCTCGACACCAAGTCCAAGATTAGGATTGGTGAGACCGTTCCAGGGTGCGACGAGAGGGTCGTTACTATTTACAGTACTAGCGAGGAGTCCAACTCGTTCGACGAGATGGACTCGCGGGTTTGCCCGGCTCAAGATGCCCTTTTTAGGGTTCATGATAGGGTTATTGCTGAGGAGTCGGGGGTTGATGATGAGCCTGAGGGTACTCAGCATGTTACTGCTAGGTTGCTTGTGCCTACTGACCAGATTGGGTGTATTATTGGGAAAGGTGGCCAGATTGTTCAGAGTATTAGGAGTGATACTGGGGCTCAGATTCGGATTCTTAAGGATGATCACTTGCCTACTTGTGCTCTGAACTCTGATGAACTTTTGCAGATATCTGGGGAAGCTCCGATTGTCAGGAAAGCTTTGTATCAGATTGCTACTCGCCTGCATGATAATCCTTCAAGGACTCAACACATGCTTGCTTCTGCTGTGCCCTCTAGTGTGTATCCTGGGGCTGGCTCACTCATGGGGCCAACTGGCGGTGCGCCTGTCTTTGCTCCAATTGTTGGTTCCTATGGAGGAGGATACAAAAGTGAGAGGGGAGATTGGCCACGTTACTCATCATCAAGGGAGGATTCTTCTATGAAAGATTTTTCCGTCCGTTTTGTATGTCCTACTGCGAATATTGGGGGTGTGATTGGCAAAGGTGGTGCTATCATTAATCAGATACGCCAAGAGACTAGAGCGAGTATTAAGGTTGATAGTTCTTCTGCAGAAGGTGATGATTGTCTTATTACCGTCTCATCAAAGGAGTATTTTGAAGACCCAGTCTCTCCCACTATTGAAGCTGCGAGGCGGTTGCAGCCCAGGTGTAGTGAAAAAGTTGAGAGGGATTCTGGAATTATTTCATTTACAGCCAGGCTCCTTGTCCCAACTTCACGGATTGGCTGCTTGATTGGTAGAGGAGGAGCTATCATTACTGAGATGAGGAATATTACAAAAGCTAACATTCGCATACTTTCAAAGAATGACCTTCCAAAAGTTGCAGATGAAGATGATGAAATGGTGCAGATCTCTGGTGACCTGGATATTGCTGAAACTGCTCTCATACACATAACATCCAGATTGAGAGCAAATCTCTTTGAGAAGGAGGGCCAAGTGATTCTTCCTGTTCTTCCATATGTCCCTCTTTCTCCAGAAGTTCCTGATAGCTTACCATATGAAGGTAGAGAGAGTAAAAGACATGGTCGTGGACTATCTTACTCTGGTGGATATGGTGGTTCTGCTGACTTGCCGCCTCCTGACCCCTATGGTAGCTATGGTGGTGTGCAGAGCAGTGGTGGTGGAAGTAGTTATGGAGTTTATGGAAGCTATTCTTCAGGACGTAGCAGTGGTTCAGGATTTTCTGCGCAAGCTCCAGTTTCGCGACGGAAGCCTTATGGTTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39027.p1 GENE.S_Transcript_39027~~S_Transcript_39027.p1 ORF type:complete len:546 (+),score=121.66,KH_1|PF00013.25|2.6e-11,KH_1|PF00013.25|8.9e-15,KH_1|PF00013.25|4e-11,KH_1|PF00013.25|1.5e-13,KH_3|PF13014.2|2.9e-08,KH_3|PF13014.2|4.1e-10,KH_3|PF13014.2|1.3e-08,KH_3|PF13014.2|4.7e-08,KH_2|PF07650.13|0.15,KH_2|PF07650.13|0.0013,KH_2|PF07650.13|0.0011,KH_2|PF07650.13|0.36,KH_4|PF13083.2|3,KH_4|PF13083.2|0.0002,KH_4|PF13083.2|0.91,KH_4|PF13083.2|1.3,KH_5|PF13184.2|8.7,KH_5|PF13184.2|0.042,KH_5|PF13184.2|6.9,KH_5|PF13184.2|8.5e+03,KH_5|PF13184.2|12 S_Transcript_39027:385-2022(+)
MAGHRNSHGKRSHSQDRSENGGGGHSKRRNPGEDPFSIGPEDTVYRYLCPATKIGSIIGRGGEIVKQLRLDTKSKIRIGETVPGCDERVVTIYSTSEESNSFDEMDSRVCPAQDALFRVHDRVIAEESGVDDEPEGTQHVTARLLVPTDQIGCIIGKGGQIVQSIRSDTGAQIRILKDDHLPTCALNSDELLQISGEAPIVRKALYQIATRLHDNPSRTQHMLASAVPSSVYPGAGSLMGPTGGAPVFAPIVGSYGGGYKSERGDWPRYSSSREDSSMKDFSVRFVCPTANIGGVIGKGGAIINQIRQETRASIKVDSSSAEGDDCLITVSSKEYFEDPVSPTIEAARRLQPRCSEKVERDSGIISFTARLLVPTSRIGCLIGRGGAIITEMRNITKANIRILSKNDLPKVADEDDEMVQISGDLDIAETALIHITSRLRANLFEKEGQVILPVLPYVPLSPEVPDSLPYEGRESKRHGRGLSYSGGYGGSADLPPPDPYGSYGGVQSSGGGSSYGVYGSYSSGRSSGSGFSAQAPVSRRKPYGY*

Click here to download the sequence:
Link to NCBI Protein BLAST