Transcript Information: S_Transcript_390346.p1


Annotated TAIR IDAT4G15560.1
Annotated Gene NameDeoxyxylulose-5-phosphate synthase
Annotated Gene Symbol(s)CLA1, DEF, CLA, DXS, DXPS2
Annotation TypeOrtholog
Chromosome Positionchr4:8884218-8887254 | Forward length=717
E-Value1.1E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.151773866223
Replicate 215.007827780403
Replicate 316.083781468256
Condition 2: 8 Hour
Replicate 17.3151048180863
Replicate 27.2838576966552
Replicate 37.3118314458948
Condition 3: 24 Hour
Replicate 120.828842398008
Replicate 219.633185609743
Replicate 317.156855787201


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_390346.p1 GENE.S_Transcript_390346~~S_Transcript_390346.p1 ORF type:internal len:172 (-),score=23.93,DXP_synthase_N|PF13292.2|1.6e-41,DXP_synthase_N|PF13292.2|9.5e-32 S_Transcript_390346:3-515(-)
TCTGGGGATTATTACTCAGAAAGACCACCCACTCCCCTTTTGGATACCATCAACTATCCTATTCACTTGAAAAATCTCTCTACTAAGGAACTTAAACAACTCGCGGATGAATTGCGTTCTGAAGTGATCTTTAATGTATCTAAAACCGGGGGTCATCTTGGTTCAAGCCTGGGCGTTGTTGAGCTTACGGTCGCTCTTCATTTTGTCTTCAATGCTCCTCAGGATAGGATTTTGTGGGATGTTGGTCACCAGACTTACCCTCACAAGATCCTGACTGGAAGAAGAGAAAAGATGAGAACATTGAGGGAAGTGATCTTTAATGTATCTAAAACCGGGGGTCATCTTGGTTCAAGCCTGGGCGTTGTTGAGCTTACGGTCGCTCTTCATTTTGTCTTCAATGCTCCTCAGGATAGGATTTTGTGGGATGTTGGTCACCAGACTTACCCTCACAAGATCCTGACTGGAAGAAGAGAAAAGATGAGAACATTGAGGGAAGTGATCTTTAATGTATCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_390346.p1 GENE.S_Transcript_390346~~S_Transcript_390346.p1 ORF type:internal len:172 (-),score=23.93,DXP_synthase_N|PF13292.2|1.6e-41,DXP_synthase_N|PF13292.2|9.5e-32 S_Transcript_390346:3-515(-)
SGDYYSERPPTPLLDTINYPIHLKNLSTKELKQLADELRSEVIFNVSKTGGHLGSSLGVVELTVALHFVFNAPQDRILWDVGHQTYPHKILTGRREKMRTLREVIFNVSKTGGHLGSSLGVVELTVALHFVFNAPQDRILWDVGHQTYPHKILTGRREKMRTLREVIFNVS

Click here to download the sequence:
Link to NCBI Protein BLAST