Transcript Information: S_Transcript_39041.p1


Annotated TAIR IDAT1G11910.1
Annotated Gene Nameaspartic proteinase A1
Annotated Gene Symbol(s)APA1, ATAPA1
Annotation TypeHomolog
Chromosome Positionchr1:4017119-4019874 | Reverse length=506
E-Value9E-142
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.719566741688
Replicate 242.2685908156
Replicate 343.944715838479
Condition 2: 8 Hour
Replicate 119.53046768523
Replicate 219.906013619316
Replicate 319.692596685163
Condition 3: 24 Hour
Replicate 149.293264149116
Replicate 248.688589198085
Replicate 341.548137276564


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39041.p1 GENE.S_Transcript_39041~~S_Transcript_39041.p1 ORF type:complete len:499 (+),score=79.03,Asp|PF00026.19|8.3e-102,SapB_2|PF03489.13|9e-13,TAXi_N|PF14543.2|5.1e-07,SapB_1|PF05184.11|1.9e+03,SapB_1|PF05184.11|3.3e+03,SapB_1|PF05184.11|1.2e-06 S_Transcript_39041:188-1684(+)
ATGGGTTACAAGAATTTCTTCCTCATTTTCTTTCATTGGCCATTATTGGTGATAACTTGTTTTCTTGCTCTGACAACTGATGGTCTAGTGAGGATTAGTCTTAAGAGGGTTCCTACGGATGCAACAAGTCAAGAGGGTGTTAAGGGAATTGTAGCAAATTATGTTGATTCAGGTAGCGCTGAAATAATATATCTCAAGAATTACATGAATGCACAATACTATGGAGAGATTGGAATTGGCACCCCACCTCAGAAATTTTCTGTTATCTTTGATACTGGAGTCTCCAATCTCTGGATCCCTTCTTCAAAATGCAATTCTATGACATGTATTCTGCATTCCAAGTACAACTCAACAAAGTCCAAAACATTCACCAAGATTGGAAAACCTTGCACTTTTAGTTATGGAACTACAGTAACCTTCAATGGTATCCTAAGTCAGGATTATATTGAGGTTGGAGACCTAGTGGTTGAAAATCAGATTTTCATCGAGGCAATCAATGAAGAAAGCGCCATTTTGGCATTAGCTAAGTTTGATGGTGTGTTGGGACTTGGATTTCAGGAAGCTTCTATCGGAAATGTTACACCCATATGGCAAGGAATGGCAGAACAAGGGCTACTAAGGAGAAATGTTTTCTCAGTGTGGTTTAACAGAAACCCAAAAGCAGAATTAGGAGGGGAGGTGGTTTTCGGAGGAGCTGATCCAAAATATTTCAAGGGAAAGCATACTTATGTTCCTGTAACTCAGAAAAATAGTATATGGCAGATTGACATTGGTGAATTCTTCATTGGGAACAGACCATCTGGCTATTGCGCAGAAGATTGTAGTGCAGTGCTCGACTCAGGATCACCATTACTATCAGCCCCTACTGTTGTTGTTACTGAAATCAACCATGCAATAGGAGCAAAAGGTGTCATAAGCGCAGAGTGCAAAGAAGTCGTCTCCCAGTATGGAGACATGATATGGGATGTTTTGGTGTCGAAGGAAAACCCAGATAAAGTATGTTCCCAGCTCAACTTCTGCTTTGCCGATGATACTCAACATCTGAGCAATGGTGTCAAGGCAGGTCAGGATAAATCAAACAGAAAATACGTTTTATCAGTCAGAGATGACAGGGTCTGCAATGCTTGTCAGATGACTGTAGTCTGGATACAGAATCAGATCAAACAGAGAACTTCAAAGAAGAAAACTTTGCTCTATGTTAATGAGCTCTGCAATAGCTTTCCAGGTCCGGAAGGAGATGTAGCAGTAGACTGTGATCATATCCCAGACATGCCAAACTTGACACTGACTATTGGAAATAAACCATTCACTCTCACTCCTGAGCAGTACATCCAAATAACTAAAGATGGCGATAAGATGGTTTGCCAATCCCAGTTCTCAGCAGTGGATCTGGAGTCTCCTGGTGATGCATGGATCCTAGGGAATATTTTCATGCAAGCGTATCATACTATCTTCAATTTTGGCAACCATCGAGTGGGTTTCGCTAAAGCAGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39041.p1 GENE.S_Transcript_39041~~S_Transcript_39041.p1 ORF type:complete len:499 (+),score=79.03,Asp|PF00026.19|8.3e-102,SapB_2|PF03489.13|9e-13,TAXi_N|PF14543.2|5.1e-07,SapB_1|PF05184.11|1.9e+03,SapB_1|PF05184.11|3.3e+03,SapB_1|PF05184.11|1.2e-06 S_Transcript_39041:188-1684(+)
MGYKNFFLIFFHWPLLVITCFLALTTDGLVRISLKRVPTDATSQEGVKGIVANYVDSGSAEIIYLKNYMNAQYYGEIGIGTPPQKFSVIFDTGVSNLWIPSSKCNSMTCILHSKYNSTKSKTFTKIGKPCTFSYGTTVTFNGILSQDYIEVGDLVVENQIFIEAINEESAILALAKFDGVLGLGFQEASIGNVTPIWQGMAEQGLLRRNVFSVWFNRNPKAELGGEVVFGGADPKYFKGKHTYVPVTQKNSIWQIDIGEFFIGNRPSGYCAEDCSAVLDSGSPLLSAPTVVVTEINHAIGAKGVISAECKEVVSQYGDMIWDVLVSKENPDKVCSQLNFCFADDTQHLSNGVKAGQDKSNRKYVLSVRDDRVCNACQMTVVWIQNQIKQRTSKKKTLLYVNELCNSFPGPEGDVAVDCDHIPDMPNLTLTIGNKPFTLTPEQYIQITKDGDKMVCQSQFSAVDLESPGDAWILGNIFMQAYHTIFNFGNHRVGFAKAA*

Click here to download the sequence:
Link to NCBI Protein BLAST