Transcript Information: S_Transcript_390593.p2


Annotated TAIR IDAT4G10340.1
Annotated Gene Namelight harvesting complex of photosystem II 5
Annotated Gene Symbol(s)LHCB5
Annotation TypeHomolog
Chromosome Positionchr4:6408200-6409496 | Forward length=280
E-Value6E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.33683648179412
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.17300619523929
Replicate 30.57760407034617


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_390593.p2 GENE.S_Transcript_390593~~S_Transcript_390593.p2 ORF type:5prime_partial len:131 (+),score=-4.44,Chloroa_b-bind|PF00504.17|3.3e-19 S_Transcript_390593:1-393(+)
AACAACCCGCTGCCGCTGATCGCGGTGACGGCCATCGAGGTGGGCCTGGTTGGCGCAGCAGAGGTATACCGCCGCCGTGGCGAGGGCCCCCCGGGCTACTCGCCAGGCGTGGGCAAGTTCGACTCCGACATCTTCCGTGGCATGGACAACCTGTACCCCGGCGGGCCCTTCGACCCGCTGAAGCTGGCGCAGGACCCCGAGGTGTTCCAGGAGTTGAAGGTGAAGGAGATCAAGAACGGCCGTCTCGCAATGGTTTCCGTGCTCGCGTTTGCGGTACAAGGCTATGTCACCGGCGAGGGCCCATACGCAAACTGGGCCAAGCACGTCTCGGACCCCTTCGGCTACAACCTCTTCACCGTGCTCACCGGCGAGGACCGCCTACCCACTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_390593.p2 GENE.S_Transcript_390593~~S_Transcript_390593.p2 ORF type:5prime_partial len:131 (+),score=-4.44,Chloroa_b-bind|PF00504.17|3.3e-19 S_Transcript_390593:1-393(+)
NNPLPLIAVTAIEVGLVGAAEVYRRRGEGPPGYSPGVGKFDSDIFRGMDNLYPGGPFDPLKLAQDPEVFQELKVKEIKNGRLAMVSVLAFAVQGYVTGEGPYANWAKHVSDPFGYNLFTVLTGEDRLPTL*

Click here to download the sequence:
Link to NCBI Protein BLAST