Transcript Information: S_Transcript_39122.p1


Annotated TAIR IDAT5G27390.1
Annotated Gene NameMog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9674634-9676118 | Reverse length=241
E-Value1.1E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.109798148703
Replicate 227.196210890204
Replicate 329.1249149043
Condition 2: 8 Hour
Replicate 119.108394294065
Replicate 218.93854513561
Replicate 313.401547751647
Condition 3: 24 Hour
Replicate 117.194735024775
Replicate 222.439417402324
Replicate 322.100504255968


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39122.p1 GENE.S_Transcript_39122~~S_Transcript_39122.p1 ORF type:3prime_partial len:202 (+),score=52.62 S_Transcript_39122:35-637(+)
ATGGCCATTCTCCTCTCTTGTTCTTCTTCTCTCCACCTTCAAGTTCAACCTAAACCCCTTCAAAACCCCAAACCCTGTTCCTCACAACACCCCAAAACTCTGATTTCCACTTCTAAGAGAGACTTCATCTTCCAATCACTCTCTCTTTGCATTGCTTCTTTAACCCTTCAACCCCAAACTGCCCTTTCTGCCACTCCATCAAAATCGATTCTTTCAGGCATTTCCAACACCAAATCATGGTTTCAGTTCTTTGGAGATGGATTTTGCATTCGTGTTCCTCCGCAGTTTGAGGATATTATGGAGCCTGAGGATTTCAATGCTGGATTGTCTCTTTATGGAGACAAGGCAAAGCCCAAGACATTTGCAGCTCGTTTTGCATCTTTTGATGGGTCTGAGGTGGTGAGTGTTATTATTAAGCCATCAAATCAACTGAAGATCACCTTCCTTGAGGCCCAGGATGTTACTGACTTGGGTTCACTTAAGGAGGCAGCAAAGATTTTCATCCCAGGCGGGGCAACAATATTTGCAGCTCGAACTATAAAAATAAAAGAAGATGAAGGTTTCAGGACCTACTACTTCTATGAGTTTGGCAGAGATGAGCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39122.p1 GENE.S_Transcript_39122~~S_Transcript_39122.p1 ORF type:3prime_partial len:202 (+),score=52.62 S_Transcript_39122:35-637(+)
MAILLSCSSSLHLQVQPKPLQNPKPCSSQHPKTLISTSKRDFIFQSLSLCIASLTLQPQTALSATPSKSILSGISNTKSWFQFFGDGFCIRVPPQFEDIMEPEDFNAGLSLYGDKAKPKTFAARFASFDGSEVVSVIIKPSNQLKITFLEAQDVTDLGSLKEAAKIFIPGGATIFAARTIKIKEDEGFRTYYFYEFGRDEQ

Click here to download the sequence:
Link to NCBI Protein BLAST