Transcript Information: S_Transcript_39123.p1


Annotated TAIR IDAT5G27390.1
Annotated Gene NameMog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9674634-9676118 | Reverse length=241
E-Value7E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.449888066475
Replicate 232.747285129393
Replicate 321.574521456287
Condition 2: 8 Hour
Replicate 120.252414703692
Replicate 214.070345056432
Replicate 327.08051079375
Condition 3: 24 Hour
Replicate 127.890008481702
Replicate 231.35873299872
Replicate 335.850201481486


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39123.p1 GENE.S_Transcript_39123~~S_Transcript_39123.p1 ORF type:complete len:159 (+),score=36.94 S_Transcript_39123:35-511(+)
ATGGCCATTCTCCTCTCTTGTTCTTCTTCTCTCCACCTTCAAGTTCAACCTAAACCCCTTCAAAACCCCAAACCCTGTTCCTCACAACACCCCAAAACTCTGATTTCCACTTCTAAGAGAGACTTCATCTTCCAATCACTCTCTCTTTGCATTGCTTCTTTAACCCTTCAACCCCAAACTGCCCTTTCTGCCACTCCATCAAAATCGATTCTTTCAGGCATTTCCAACACCAAATCATGGTTTCAGTTCTTTGGAGATGGATTTTGCATTCGTGTTCCTCCGCAGTTTGAGGATATTATGGAGCCTGAGGATTTCAATGCTGGATTGTCTCTTTATGGAGACAAGGCAAAGCCCAAGACATTTGCAGCTCGTTTTGCATCTTTTGATGGGTCTGAGGTGGTGAGTGTTATTATTAAGCCATCAAATCAACTGAAGATCACCTTCCTTGAGGTTTGTTTCTTTTCTTACTTTAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39123.p1 GENE.S_Transcript_39123~~S_Transcript_39123.p1 ORF type:complete len:159 (+),score=36.94 S_Transcript_39123:35-511(+)
MAILLSCSSSLHLQVQPKPLQNPKPCSSQHPKTLISTSKRDFIFQSLSLCIASLTLQPQTALSATPSKSILSGISNTKSWFQFFGDGFCIRVPPQFEDIMEPEDFNAGLSLYGDKAKPKTFAARFASFDGSEVVSVIIKPSNQLKITFLEVCFFSYFN*

Click here to download the sequence:
Link to NCBI Protein BLAST