Transcript Information: S_Transcript_39142.p2


Annotated TAIR IDAT1G56110.1
Annotated Gene NameHomolog of nucleolar protein NOP56
Annotated Gene Symbol(s)NOP56
Annotation TypeOrtholog
Chromosome Positionchr1:20984544-20986893 | Reverse length=522
E-Value2.1E-269
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.930411382156
Replicate 230.601977810073
Replicate 329.10141017745
Condition 2: 8 Hour
Replicate 139.028078601408
Replicate 236.006530472695
Replicate 335.613517714802
Condition 3: 24 Hour
Replicate 118.05741682585
Replicate 216.8291700672
Replicate 317.624510889039


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39142.p2 GENE.S_Transcript_39142~~S_Transcript_39142.p2 ORF type:complete len:571 (+),score=152.57,Nop|PF01798.14|1.3e-88,Nop|PF01798.14|5.8e+03,NOP5NT|PF08156.9|3e-19,NOP5NT|PF08156.9|1.1e+04 S_Transcript_39142:119-1831(+)
ATGGGGACGTACTTGTTGTTTGAGTCACCATCAGGGTATGCTCTGTTTCATGCAAATGGGTTGGATGAAATTGGGCAGAACACAGGTGCTGTTAGGGAGTCTGTTACTGACCTTAACAGGTTTGGTAAAGTTGTTAAGCTTACTGCTTTTCAACCTTTTGAGTCTGCCCTTGATGCTCTCACTCAATGCAATTCTGTCTCTGAAGGTATCATGACTGATGAGTTGAGAAATTTCTTGGAGCTGAATTTCCCACAGAAGGGAAAAGACTTTGTTCTAGGAGTCGCTGACTCGAGACTTGGAGCAAGTATTTCAGAAGGAACTAAGATTTCATGCCGATGTAATGAGTTTGTCCTAGAACTTCTCCGTGGTGTGCGTACACACTTTGAGAAGTTCATCAAGGAACTCAAGCCTGGTGATTTGGAGAAAGCTCAACTAGGTCTTGGACACAGTTACAGCAGAGCCAAAGTCAAATTCAATGTTAACCGTGTTGATAACATGGTCATTCAAGCTATCTTTCTCCTTGACACTCTAGATAAAGACATAAACTCATTTTCCATGAGAGTCAGAGAATGGTACTCTTGGCATTTCCCTGAACTAGTAAAGATAGTCAACTACAACTATCTCTACGCAAAGGTAGCAAAATTCATTGAGAACAAGTCAGAGTTATCTGAGGACAAACTTCCTGCCTTAACTGAAATTCTCGGTGATGAAGATAAGGCTAAGGAGATTGTTGAAGCAGCCAAGGCATCTATGGGACAAGACTTGTCTCCTGTTGATTTGATCAATGTGCAGATGTTTGCTCAAAGAGTGATGGATCTTGCTGAGTACAGAAAGAAGCTTTTTGACTACTTGGTAACAAAAATGAATGACATAGCACCTAATTTGACCTCTTTGATTGGTGAGATTGTTGGGGCCAGATTGATCTCCCATGCAGGCAGTCTTACAAACCTAGCAAAGTGCCCTTCTTCAACACTCCAAATTCTTGGTGCTGAGAAGGCACTTTTTAGGGCTCTGAAAACAAAAGGAAATACGCCAAAGTATGGTCTGATATTCCATTCATCATTTATTGGAAGAGCTTCCTCTAGGAACAAAGGCCGCATGGCTCGCTACCTAGCTAACAAGTGCTCCATTGCATCTCGTGTTGACTGTTTCTCAGAGAGGGGTACTACTGCTTTTGGTGAAAAGCTTCGTGAACAAGTAGAGGAGCGACTTGACTTCTACGACAAGGGAGTAGCACCAAGGAAAAACATTGATGTCATGAAAGCAGCCCTTGAAATTTCCCAAAAGAACGATGAAGATATGGACTTGGATGAGAAACCTGACTCTGCCGTAAAAAAGAGCAAGAAAAAGAAATCAAAGGGTGAGGCTGTTGCTGCAACAAACGGTCATGGATCAGAGGAGATGAAGTCTGAGAAGAAGAAAAGGAAGGACAAGAAGACAGAGCCAGAAAGTGAGGAGGATCACGAAGATGCCAAGTCTGAGAAGAAAAAGAAGAAAGAAAAGCGTAGATTAGAGGAACAGGAACAGGAACAGGCCGAACCTGAGGAGGATGGAACAAGCAAGAAGAAGAAGAAAAAGAAAAGCAAAAGAAGAAGAATTCGAATGCGAATGTGGCGGTTCCTTACACAATTCCAGAGTGGAGTAGAGCTCCTTCTCACCCTTTTCAGCTCGAAGTTCTCAAGGATGGCTCCATCATCGACCACCTTGACGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39142.p2 GENE.S_Transcript_39142~~S_Transcript_39142.p2 ORF type:complete len:571 (+),score=152.57,Nop|PF01798.14|1.3e-88,Nop|PF01798.14|5.8e+03,NOP5NT|PF08156.9|3e-19,NOP5NT|PF08156.9|1.1e+04 S_Transcript_39142:119-1831(+)
MGTYLLFESPSGYALFHANGLDEIGQNTGAVRESVTDLNRFGKVVKLTAFQPFESALDALTQCNSVSEGIMTDELRNFLELNFPQKGKDFVLGVADSRLGASISEGTKISCRCNEFVLELLRGVRTHFEKFIKELKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNYNYLYAKVAKFIENKSELSEDKLPALTEILGDEDKAKEIVEAAKASMGQDLSPVDLINVQMFAQRVMDLAEYRKKLFDYLVTKMNDIAPNLTSLIGEIVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTKGNTPKYGLIFHSSFIGRASSRNKGRMARYLANKCSIASRVDCFSERGTTAFGEKLREQVEERLDFYDKGVAPRKNIDVMKAALEISQKNDEDMDLDEKPDSAVKKSKKKKSKGEAVAATNGHGSEEMKSEKKKRKDKKTEPESEEDHEDAKSEKKKKKEKRRLEEQEQEQAEPEEDGTSKKKKKKKSKRRRIRMRMWRFLTQFQSGVELLLTLFSSKFSRMAPSSTTLT*

Click here to download the sequence:
Link to NCBI Protein BLAST