Transcript Information: S_Transcript_39146.p1


Annotated TAIR IDAT5G38840.1
Annotated Gene NameSMAD/FHA domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15551329-15554846 | Forward length=735
E-Value2.3E-225
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.6584543741193
Replicate 210.071538234326
Replicate 39.3260241734222
Condition 2: 8 Hour
Replicate 16.7499028620434
Replicate 26.4040474668574
Replicate 36.0480021577816
Condition 3: 24 Hour
Replicate 110.302631053572
Replicate 210.00294331869
Replicate 312.277060706652


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39146.p1 GENE.S_Transcript_39146~~S_Transcript_39146.p1 ORF type:5prime_partial len:793 (+),score=220.58,FHA|PF00498.22|7.4e-21 S_Transcript_39146:3-2381(+)
GATCTCTCGGGGAAGGTCTTGCAAATCTCAACCCTCCGCCACCCTTTCCTCTCTCTGACAATGACAACCTCCATGGATCCACCACCACCTCCAACTTCGAACACCACCTCCGACACCAACTCTTCCGCCATGGACTCGCCGGCGGAAACCACGAGTTCAGAATTAGAAGTAGAAGCCCTAGCGCCAGCTCTTCCTAGTCGACAACTGATGCCCCCTCCATTCCCTATAAAACCTAATCACGATGATAACAATAATACCCCCAATTCTGCAACTGCAACTGTAACTGTAACTGAACCCGATTCTTCCATGCCTTCTTCAGAACCACAAGAAGAAGAAGAAGAAGAAGTAGAAGAAAAGCAAAGGAAGAAGAATTCGAATGCGAATGTGGCGGTTCCTTACACAATTCCAGAGTGGAGTAGAGCTCCTTCTCACCCTTTTCAGCTCGAAGTTCTCAAGGATGGCTCCATCATCGACCACCTTGACGTAACAAAGAAAGGGGCTTACATGTTTGGTCGTATTGATCTCTGTGATTTCGTTCTCGAGCACCCTACTATCTCCCGCTTTCATGCTGTTCTCCAGTTCAAGGGAAATGGAAAAGCCTATCTTTATGATCTTGGAAGCACGCATGGAACATTTATTAACAAAAATCAGGTCAAAAAGAAAGTGTATGTGGAGCTGCATGTGGGTGATGTAATTCGATTTGGCCTTTCGTCTCGATTGTATATATTCCAAGGCCCAACTGAATGGATGCCACCAGAAGCTGATCTGACGAGTATTACGTATGCTAAGGATCGGGAAGCTTCCCTTCGCCGGGCAAGAGAGGATGCAGCTCTTGCTGGTGGTGTTTTGTGGGGTATGAGGGAGGATGCAATTGAAGAAGAAGAGGATGATACTGATGAGATAACATGGCAAAACTACAAAGGAGAACTCACAGAAAAACAACAGAAAACCCGGGAGAAAGTTCTCAAAAGGATGGAGAAGATTGCACATATGAAAAAAGAGATATCTGCAATTCGTGCTAAAGACATATCCCAAGGAGGTTTGACCCAAGGACAACAAACACAAATTGCCCGAAATGAGCTTCGGATATCTCAGATAATGGAAGAGTTAGAGAGCTTGGAGGAGACATTAAATGATAGTATCCGAGAAAGTTTAGGTGCTCGTTCTGGGAAATCATCTCGTGGTAGGCAAAAAGGGGCAGCTGAGGACGAGGATGAGTTTTTAAGTGATGATGATGAGTTTTATGACCGAACAAAGACAGTTCGTAAACCTGTTGATACACAGTCAATTGAAACAGCGGATTCTCTTCTGGATAAGAAAGAGGCACTGGTGAATGAAATGGAAGAAAAGCGAAGATTGATTCTGGAAGAGAAGAACAAAGCTCCCGAACCTGATAAACAAGATGCTGGAGATGCACTGGATGCGTTTATGTCTGGTCTCTCATCTCAGCTTGTTCATGATAAGACTCTGCAACTTGAGAGGGATCTATCCTCCCTTCAGGCAGAGTTGGATAGGATTGTGTACTTGCTCAAGTTCGCTGACCCTACGGGAGATGCTGCTAAGAAAAGGGAGACCACTTCCCAGAAGCCCAAATCTAATGAATCAGCATCTTCTAGTGTTCCTGTCAAGAGACCTGAGAAATCTCAAATTGAACTCAAAAAGGTCATTCAAGATAAGAAGCCAGTTAGCACTTCAAAAAAGGTCAATCAGGATGGGAAGTCAATTAGCAGCTCCATCACAAAAGAAACAGAGCCAAATGTAACTGGAGAAACTAGTGACAAACCAAAACCTGATGTAGATGTAGCTGATCCGACCGGAAGAAAACCTGCTGTTTATCAGGTTGCAAAGCCCCAGTGGCTTGGGGCAGTGGCGGACAAGGAAAGGGAAGAGACCCAGCAAGAGAAACATGCAGACACCCATGATGATGAGGACGGCTTTGTTGATTACCAAGATAGGAACAAGATTCTGAGTTCCAATAATTCTCAGCCAGAATTGCTGGAGTCTGATCTTGAAAATGCTGCCCCAGGTCTTATATTGAGGAAAAAGAAACAGGTCAAAGGAACAGAAACAAGGGAGGAGGAACCATCGAATCCATCAACACAGGGACCTGCTGGAGCTGACATGATGGCCGAAAATGCCATTGCTTTATTGTTGAAACATAAACGAGGACTCCATGCTTCTGATGAAGAAGTGACTCTTGAAAGCCATGACAGAAGAGGTCAAAAGTCATCTGGACAGGATAACAAAAGACCTAGAAGAGTTCTTGGCCCCGAAAAGCCTGCTTTCCTGCAGACCAATTCGGACTACGAAACATGGGTACCCCCAGAAGGACAATCTGGTGATGGGCGGACATCATTGAATGATCGTCTTGGTTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39146.p1 GENE.S_Transcript_39146~~S_Transcript_39146.p1 ORF type:5prime_partial len:793 (+),score=220.58,FHA|PF00498.22|7.4e-21 S_Transcript_39146:3-2381(+)
DLSGKVLQISTLRHPFLSLTMTTSMDPPPPPTSNTTSDTNSSAMDSPAETTSSELEVEALAPALPSRQLMPPPFPIKPNHDDNNNTPNSATATVTVTEPDSSMPSSEPQEEEEEEVEEKQRKKNSNANVAVPYTIPEWSRAPSHPFQLEVLKDGSIIDHLDVTKKGAYMFGRIDLCDFVLEHPTISRFHAVLQFKGNGKAYLYDLGSTHGTFINKNQVKKKVYVELHVGDVIRFGLSSRLYIFQGPTEWMPPEADLTSITYAKDREASLRRAREDAALAGGVLWGMREDAIEEEEDDTDEITWQNYKGELTEKQQKTREKVLKRMEKIAHMKKEISAIRAKDISQGGLTQGQQTQIARNELRISQIMEELESLEETLNDSIRESLGARSGKSSRGRQKGAAEDEDEFLSDDDEFYDRTKTVRKPVDTQSIETADSLLDKKEALVNEMEEKRRLILEEKNKAPEPDKQDAGDALDAFMSGLSSQLVHDKTLQLERDLSSLQAELDRIVYLLKFADPTGDAAKKRETTSQKPKSNESASSSVPVKRPEKSQIELKKVIQDKKPVSTSKKVNQDGKSISSSITKETEPNVTGETSDKPKPDVDVADPTGRKPAVYQVAKPQWLGAVADKEREETQQEKHADTHDDEDGFVDYQDRNKILSSNNSQPELLESDLENAAPGLILRKKKQVKGTETREEEPSNPSTQGPAGADMMAENAIALLLKHKRGLHASDEEVTLESHDRRGQKSSGQDNKRPRRVLGPEKPAFLQTNSDYETWVPPEGQSGDGRTSLNDRLGY*

Click here to download the sequence:
Link to NCBI Protein BLAST