Transcript Information: S_Transcript_39157.p2


Annotated TAIR IDAT5G62140.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 60 proteins in 24 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24954563-24955376 | Reverse length=241
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14463587627815
Replicate 20
Replicate 30.20046452264783
Condition 2: 8 Hour
Replicate 10.1158988604192
Replicate 20.12158613391156
Replicate 30.11584699785316
Condition 3: 24 Hour
Replicate 10
Replicate 20.36951866700566
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39157.p2 GENE.S_Transcript_39157~~S_Transcript_39157.p2 ORF type:complete len:184 (-),score=21.57 S_Transcript_39157:3064-3615(-)
ATGGAATCCCGGTCTGTTTCCTCCATCCCACAGATCCACAGCCAAATAAAACCCATGAATGATGTCCTCGGACGTTCAGACCATAGAGTTTGCATGATCCGATTACCAAAGACTAGTAATAAAGTTCACAACAACATTAGGATCAAAACACTGGATGGCTGCAAGCTGGGCATTTCGCAGTACAGCTTAATCTACAATGCTGAAGGTGGGAGGGGAACTGGGAGTCTAGCCAAGGTGAAGGAAGACGAAACCAATGGCCAAGTTTTAATCCGATTTCAGTTGGATTTGAAAACAGTACACATCCCACCAGTGACAAGCATAACAGCAAAGGCTGAAGGGCATGTTCCATACCCGCCTTTCTGTAAGGTTGAAATTGTGCCCGAAATTCTCCAGGGGAACATATATGAGGAATCTGGAAAGGTAGATCAGCTATATCCTACAAACACTTCAGCAATGAACAATTGCATCCACAACAATAACAATTACTATCCTTGCTCATTTATTTTTGGACAAGAAGTTACGCTAAGTTTCCCATCAAACAGAAAAATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39157.p2 GENE.S_Transcript_39157~~S_Transcript_39157.p2 ORF type:complete len:184 (-),score=21.57 S_Transcript_39157:3064-3615(-)
MESRSVSSIPQIHSQIKPMNDVLGRSDHRVCMIRLPKTSNKVHNNIRIKTLDGCKLGISQYSLIYNAEGGRGTGSLAKVKEDETNGQVLIRFQLDLKTVHIPPVTSITAKAEGHVPYPPFCKVEIVPEILQGNIYEESGKVDQLYPTNTSAMNNCIHNNNNYYPCSFIFGQEVTLSFPSNRKI*

Click here to download the sequence:
Link to NCBI Protein BLAST