Transcript Information: S_Transcript_39157.p3


Annotated TAIR IDAT5G62140.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 60 proteins in 24 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24954563-24955376 | Reverse length=241
E-Value8E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.1752356735522
Replicate 27.0658607079623
Replicate 35.4243341422355
Condition 2: 8 Hour
Replicate 11.6725796327163
Replicate 22.3395397270302
Replicate 32.7863853078407
Condition 3: 24 Hour
Replicate 110.137168155766
Replicate 29.1840282204806
Replicate 39.2315979521993


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39157.p3 GENE.S_Transcript_39157~~S_Transcript_39157.p3 ORF type:5prime_partial len:153 (-),score=29.83 S_Transcript_39157:5292-5750(-)
ACACCAACCTTAATCTCATACTCTTCATCACAACCTAGACTGCTTGTAACGCGAGTGCTAGCCCTATCTTCATCTTCCCCTAGCCAAAAAACCGAGGAAATTTTCAGTTCTTCAACCACCAAAGAAATTCAAGAATTGAAGAAAACAAGTTCTTACAATGTTGAGTTCAAAACCAAGGGAGGTTGCAAGCTTGGGATCGCAAAATACCCGGATTTCGAGTATAATGCAAATGGTGGGCTTGGTACAGGAAGTGGAGCAGATGACCAGAATGGGGAGATTTTGGTTAATTTTGATGTGGAAAAGCTTTACATTCCACCATTAACAAGAGAGACAACCAAGTTCTTGGGTTTGCCATTGCCACCATTTTTGAGGATTGATATTGTGCCTGGAATGTTTCAGGGAAGCATTGATAAAGAGTCTGGCAAGGTCAGTTTGACCTGTGCATTTAAGTTAATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39157.p3 GENE.S_Transcript_39157~~S_Transcript_39157.p3 ORF type:5prime_partial len:153 (-),score=29.83 S_Transcript_39157:5292-5750(-)
TPTLISYSSSQPRLLVTRVLALSSSSPSQKTEEIFSSSTTKEIQELKKTSSYNVEFKTKGGCKLGIAKYPDFEYNANGGLGTGSGADDQNGEILVNFDVEKLYIPPLTRETTKFLGLPLPPFLRIDIVPGMFQGSIDKESGKVSLTCAFKLI*

Click here to download the sequence:
Link to NCBI Protein BLAST