Transcript Information: S_Transcript_391613.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.25837391036341
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_391613.p1 GENE.S_Transcript_391613~~S_Transcript_391613.p1 ORF type:5prime_partial len:165 (-),score=17.66,RVT_1|PF00078.23|1.7e-29 S_Transcript_391613:326-820(-)
ATTGTTTTATGTAATGTACTATATAAGACTCTTACTAAGATCCTAGCAAACAGAATCCAATATGTCATCAGCCATGTGGTGGGAAAGGAGCAAGCTGCTTTTGTGGAGGGTCGAGATATGTTTGATAAAGTCATCTTGACTCAGGAATTGACTCAACATTATGATAGAGGTAATATTTCCCCTAGAATTTTTATGAAGATTGATATTCAAAAAGCTTATGATACTCTGAATCGGGATTTCATTCATAGTATGCTTTGTCATCTTGGATTCCCTGAAAAGTTTGTTAGCTGGACCATGTTATGCATTACCACCTCTAGATTCTCAGTCAATATTAATGGCAGCCCTAGAGGATACTTTGAGGGGAAATGTGGCCTAAGACAAGGGGATCCAATTTCTCCCTACATCTTTGTGATATGTATGGAGGGACTTTCTAGAATGATGAGGAAAGCTGGAACTTTGAAACAATTTTCCTACCATCCAAAGACTGAGAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_391613.p1 GENE.S_Transcript_391613~~S_Transcript_391613.p1 ORF type:5prime_partial len:165 (-),score=17.66,RVT_1|PF00078.23|1.7e-29 S_Transcript_391613:326-820(-)
IVLCNVLYKTLTKILANRIQYVISHVVGKEQAAFVEGRDMFDKVILTQELTQHYDRGNISPRIFMKIDIQKAYDTLNRDFIHSMLCHLGFPEKFVSWTMLCITTSRFSVNINGSPRGYFEGKCGLRQGDPISPYIFVICMEGLSRMMRKAGTLKQFSYHPKTES*

Click here to download the sequence:
Link to NCBI Protein BLAST