Transcript Information: S_Transcript_39172.p1


Annotated TAIR IDAT3G13062.2
Annotated Gene NamePolyketide cyclase/dehydrase and lipid transport superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:4184777-4187268 | Forward length=440
E-Value8E-87
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.362161946462
Replicate 216.899157958948
Replicate 322.983348918773
Condition 2: 8 Hour
Replicate 16.6763380020204
Replicate 27.4799493932217
Replicate 38.8114142075303
Condition 3: 24 Hour
Replicate 125.164774598587
Replicate 222.939359437458
Replicate 322.845499187613


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39172.p1 GENE.S_Transcript_39172~~S_Transcript_39172.p1 ORF type:3prime_partial len:329 (+),score=60.55,START|PF01852.15|8e-07 S_Transcript_39172:111-1094(+)
ATGTCGGAAATATTAGTATCATCATCATCAACAACAACAACAACAGCAAGTTCATTTTCAGCAGAATTCTGGAAGGAAAATAAGGGAGGAGGATGGGCAGTAGTAATAGCTATATCTATCATCTTCATTTGGCAATTCTCCAAATTCCTTTTAATTTCTCCATTCTCATTTCGTGCACTATTATTCCGATTTAGGGCTACTAAATCTCCGCCTTCTTCTGCTCCACTTTCTGTTTCTTTTGATTCCTCACATTCTCTTTCCTCTTCTAGGATATCAGAACTTATATCAGAAGGTGATTTGAAAAGTTTGATTGTCAATTTGGATGAAAAGGCCAACGAGACTGAAAAATGGGAAAATGTCATTGAAAAAAGCAAGGGTGTTATATCCTACAGAGCAAAATGCTGCAAATCAAAGGATGGTCCTGTCAAATACTTGAGCGTGACTGTGTTTGAAAATTGCTCCCCTGAGGCCTTACGAGATTTCTACATGGACTCTGAGTTTAGGAAGCAGTGGGACAAGACCTTGGCTGACCATGAACAATTGCAGATTGATGTAAGAAGTGGAATTGAGATTGGCCGAACTGTAAAGAAGTTCCCACTATTGACACATAGAGAGTATGTTTTGGCATGGAAGGTTTGGGAAGGCAGCAATAAGACCTTTTACTGCTTTACAAAGGAATGTGAACATCCACTGGCACCAAGACAGAGGAAGTATGTACGCGTTGCACTCTATAGCTCTGGATGGAGAATAAGACAAGTACCTGGAACAAATGCCTGTGAGATAAAAATGTTGCACCAAGAAGATGCTGGTTTGAATGAAGAGGTGGCAAAATTGGTCTTTGCAAAAGGGATCTGGGGTTACGTGGGTAAAATGAATGATGCTTTACGAAAGTATACTTCTCTCCGTCCACAGTCCAGTTTAGCCATCACTGCTGTCTCTCGTATTCAGAAGGTCCCACCCAAGCTAGAAGCCATAAGCAGATCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39172.p1 GENE.S_Transcript_39172~~S_Transcript_39172.p1 ORF type:3prime_partial len:329 (+),score=60.55,START|PF01852.15|8e-07 S_Transcript_39172:111-1094(+)
MSEILVSSSSTTTTTASSFSAEFWKENKGGGWAVVIAISIIFIWQFSKFLLISPFSFRALLFRFRATKSPPSSAPLSVSFDSSHSLSSSRISELISEGDLKSLIVNLDEKANETEKWENVIEKSKGVISYRAKCCKSKDGPVKYLSVTVFENCSPEALRDFYMDSEFRKQWDKTLADHEQLQIDVRSGIEIGRTVKKFPLLTHREYVLAWKVWEGSNKTFYCFTKECEHPLAPRQRKYVRVALYSSGWRIRQVPGTNACEIKMLHQEDAGLNEEVAKLVFAKGIWGYVGKMNDALRKYTSLRPQSSLAITAVSRIQKVPPKLEAISRS

Click here to download the sequence:
Link to NCBI Protein BLAST