Transcript Information: S_Transcript_39182.p1


Annotated TAIR IDAT1G58100.1
Annotated Gene NameTCP family transcription factor
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21512680-21513885 | Reverse length=401
E-Value9.2E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 153.696196838474
Replicate 263.30383434877
Replicate 364.38665459575
Condition 2: 8 Hour
Replicate 150.93980160559
Replicate 253.91378364768
Replicate 349.711870739533
Condition 3: 24 Hour
Replicate 198.726522913321
Replicate 283.848094418501
Replicate 382.796039760964


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39182.p1 GENE.S_Transcript_39182~~S_Transcript_39182.p1 ORF type:3prime_partial len:283 (+),score=65.94,TCP|PF03634.9|3.7e+03,TCP|PF03634.9|7.1e-34 S_Transcript_39182:189-1034(+)
ATGGATGACAACAGAAACCCAGAAGAAAAACACCACACCCTACTCGTAACTTCCAGCAACAACACAACCAGCAACAACGCTTCAGATGAAAACACCAACAACCAAAACCAACAACAAAAAAAGCAGCAGCAACAACAACAACAATTAGCACCAAAAAGAAGTTCCAACAAAGACAGACACACAAAGGTAGATGGGAGAAGCAGAAGAATAAGAATGCCAGCCCTATGTGCAGCAAGAGTATTCCAACTAACAAGAGAATTGGGTCATAAAACTGATGGTGAAACCATTCAATGGCTTCTTCAACAAGCTGAACCTGCTATTATTACTGCTACTGGTACTGGCACTATTCCTGCTTCTTTTCTAACAGCCTCTGGTTCCTCTGCTTCTCAACAGGGGAACTCTGTTTCTCTAGGTTTACACTCCAAAATCGCTTCCAATAATTGGGGTCATTTTGGGGATAATTTAGGGAGATCTCAAGTGGGTGCTACTACATCAATTTGGCCTTATGCTCAAGTTTTTGATAATTCCACTTCTTCTGGTGCTAGTAATACACCCAATTTGGGGGGTGTTCAAAATTCAAACTTTATGACAAATTTTTCCTTACAAGGGGTGGGTTTGCCTACTGCTAATATGGGTCTTCTTAGTTTTACCCCTATTTTGACTAGAGCTGCTGATGGGGCTCAGATTCCTGCTGGTCTTCAATTGGGTTTATCTCAAGAAGGTCATGGTGTTATTGGTCAAATCTACCATCAACAACAACAACAACAGCAACAGCAGCAACAAGGGCAAGACCTAAATAATGATAATACTAATGGTGGTGGTGAAAGTGCTGAGCCTGTACATCAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39182.p1 GENE.S_Transcript_39182~~S_Transcript_39182.p1 ORF type:3prime_partial len:283 (+),score=65.94,TCP|PF03634.9|3.7e+03,TCP|PF03634.9|7.1e-34 S_Transcript_39182:189-1034(+)
MDDNRNPEEKHHTLLVTSSNNTTSNNASDENTNNQNQQQKKQQQQQQQLAPKRSSNKDRHTKVDGRSRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPAIITATGTGTIPASFLTASGSSASQQGNSVSLGLHSKIASNNWGHFGDNLGRSQVGATTSIWPYAQVFDNSTSSGASNTPNLGGVQNSNFMTNFSLQGVGLPTANMGLLSFTPILTRAADGAQIPAGLQLGLSQEGHGVIGQIYHQQQQQQQQQQQGQDLNNDNTNGGGESAEPVHH

Click here to download the sequence:
Link to NCBI Protein BLAST