Transcript Information: S_Transcript_39185.p1


Annotated TAIR IDAT5G22340.2
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:7394509-7396609 | Forward length=340
E-Value1E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5294828296081
Replicate 22.8740798657299
Replicate 32.9677966111541
Condition 2: 8 Hour
Replicate 13.5950849576776
Replicate 23.0857722261692
Replicate 32.6134372542506
Condition 3: 24 Hour
Replicate 12.0924217902868
Replicate 21.9103595964737
Replicate 31.4495427819032


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39185.p1 GENE.S_Transcript_39185~~S_Transcript_39185.p1 ORF type:5prime_partial len:261 (+),score=23.97 S_Transcript_39185:3-785(+)
TATACCTCGAGGCCCAGCATACAAGTGGGTCAATTTCACTGCAACCACTCGGTGCGTGCTGGGATAAAGACTCCTATCCAAATTCAAGGCAAAACTGCTGCAGATATTTGTTTCGCCATTGATTCACTAACAGGCCACACGCACACACAGCCGAGCAGTGTGGAAATGGAGACTCTATCAAGGGTAAGCTGGCTACAATTCACCAGCTGCCCTTCCTTGGGTAGAAAATCCAATAAGCTTACCGTTTTCCCACAGTATGATTTTACTCTTAGAAGTAGAATGCCCACAGTCTCGGTCCTCAAGACCCCTTCTTCTGCTAGTGAACGCGCAGAAGAAGACCTTCTCGAAGAATTTTTTCGGGATAGACAGTTAAATGGGGATCTCATAACAAGATATTCTGATATTCTTTACCAGAGGAGAATAATGAGAGTTGACGTTGCAGATGCTGTGAAAGTAGCTGGCAGTTCTCAACCAACTGAGGGGGCCTTGGTTGATGAGCCTGAGGGAGGCTTTTTAAAATTGACAAAAACTCAAGAATGGTTGCTAGGTGAAACATCTCCACCACTCAATAGGAAGCCAACAAATACGGAACTGCAGGACGATAGAGATAGAACAAGAAGACTCAACATTCTTAGATATGAAGCTGTAAGGTCTTTGAATTTCATTTTTATGATATCAATATCAGATTTTTTATCGTATTATAGAGCTGTAAAGTTAGAAGTTGCTTTCTGGTGTCATTTATGTTTTGCTATTCTCCTATTTTCTGAATCATGTAACTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39185.p1 GENE.S_Transcript_39185~~S_Transcript_39185.p1 ORF type:5prime_partial len:261 (+),score=23.97 S_Transcript_39185:3-785(+)
YTSRPSIQVGQFHCNHSVRAGIKTPIQIQGKTAADICFAIDSLTGHTHTQPSSVEMETLSRVSWLQFTSCPSLGRKSNKLTVFPQYDFTLRSRMPTVSVLKTPSSASERAEEDLLEEFFRDRQLNGDLITRYSDILYQRRIMRVDVADAVKVAGSSQPTEGALVDEPEGGFLKLTKTQEWLLGETSPPLNRKPTNTELQDDRDRTRRLNILRYEAVRSLNFIFMISISDFLSYYRAVKLEVAFWCHLCFAILLFSESCNY*

Click here to download the sequence:
Link to NCBI Protein BLAST