Transcript Information: S_Transcript_39188.p1


Annotated TAIR IDAT5G22340.2
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7394509-7396609 | Forward length=340
E-Value1.1E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3430939515746
Replicate 22.9876694192468
Replicate 34.2264603524918
Condition 2: 8 Hour
Replicate 19.7000907345292
Replicate 28.6224833298946
Replicate 36.8092290960357
Condition 3: 24 Hour
Replicate 13.8683647847927
Replicate 24.1707708803695
Replicate 34.7291333259593


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39188.p1 GENE.S_Transcript_39188~~S_Transcript_39188.p1 ORF type:internal len:288 (+),score=40.34 S_Transcript_39188:3-863(+)
TATACCTCGAGGCCCAGCATACAAGTGGGTCAATTTCACTGCAACCACTCGGTGCGTGCTGGGATAAAGACTCCTATCCAAATTCAAGGCAAAACTGCTGCAGATATTTGTTTCGCCATTGATTCACTAACAGGCCACACTGTGGAAATGGAGACTCTATCAAGGGTAAGCTGGCTACAATTCACCAGATGCCCTTCCTTGGGAAGAATACCCAATAAGATTACCATTTTCCCACAGTATGACTTTACTCTCAGAAGTAGAATGCCCACAGTCTCGGTCCTCAAGACCCCTTCTTCTGCTAGTGAACGCGCAGAAGAAGACCTTCTCGAAGAATTTTTTCGGGATAGACAGTTAAATGGGGATCTCATAACAAGATATTCTGATATTCTTTACCAGAGGAGAATAATGAGAGTTGACGTTGCAGATGCTGTGAAAGTAGCTGGCAGTTCTCAACCAACTGAGGGGGCCTTGGTTGATGAGCCTGAGGGAGGCTTTTTAAAATTGACAAAAACTCAAGAATGGTTGCTAGGTGAAACATCTCCACCACTCAATAGGAAGCCAACAAATACGGAACTGCAGGACGATAGAGATAGAACAAGAAGACTCAACATTCTTAGATATGAAGCTCTTAAGAGGGAACTTCTGTTCATGACTTTGGGGGTAGGAGCTGCATGTACTGGGTATTGCTTGTTAACCTTGTCAGTCCAGGCAGCAGTGAGCTATGCTTCAGGAGTTGGATTCAGTTGCGTGTATTTACAACTCTTGTCCCAGCATGTGGACAACTTATCCAAGGATTCGGTTCCGCAGATATTCACGCAAAAGAAGAAAAAGAAAATTGGGATACGAAGTGAGGATTTGCAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39188.p1 GENE.S_Transcript_39188~~S_Transcript_39188.p1 ORF type:internal len:288 (+),score=40.34 S_Transcript_39188:3-863(+)
YTSRPSIQVGQFHCNHSVRAGIKTPIQIQGKTAADICFAIDSLTGHTVEMETLSRVSWLQFTRCPSLGRIPNKITIFPQYDFTLRSRMPTVSVLKTPSSASERAEEDLLEEFFRDRQLNGDLITRYSDILYQRRIMRVDVADAVKVAGSSQPTEGALVDEPEGGFLKLTKTQEWLLGETSPPLNRKPTNTELQDDRDRTRRLNILRYEALKRELLFMTLGVGAACTGYCLLTLSVQAAVSYASGVGFSCVYLQLLSQHVDNLSKDSVPQIFTQKKKKKIGIRSEDLQ

Click here to download the sequence:
Link to NCBI Protein BLAST