Transcript Information: S_Transcript_39189.p1


Annotated TAIR IDAT5G22340.2
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:7394509-7396609 | Forward length=340
E-Value8E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3832538419565
Replicate 23.7868967150958
Replicate 33.0279118943225
Condition 2: 8 Hour
Replicate 15.4904922831424
Replicate 25.6764392070948
Replicate 35.6471088804242
Condition 3: 24 Hour
Replicate 13.1789196124372
Replicate 22.0295950665386
Replicate 32.9174752856664


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39189.p1 GENE.S_Transcript_39189~~S_Transcript_39189.p1 ORF type:internal len:268 (+),score=34.28 S_Transcript_39189:3-803(+)
TATACCTCGAGGCCCAGCATACAAGTGGGTCAATTTCACTGCAACCACTCGGTGCGTGCTGGGATAAAGACTCCTATCCAAATTCAAGGCAAAACTGCTGCAGATATTTGTTTCGCCATTGATTCACTAACAGGCCACACTGTGGAAATGGAGACTCTATCAAGGGTAAGCTGGCTACAATTCACCAGATGCCCTTCCTTGGGAAGAATACCCAATAAGATTACCATTTTCCCACAGTATGACTTTACTCTCAGAAGTAGAATGCCCACAGTCTCGGTCCTCAAGACCCCTTCTTCTGCTAGTGAACGCGCAGAAGAAGACCTTCTCGAAGAATTTTTTCGGGATAGACAGTTAAATGGGGATCTCATAACAAGATATTCTGATATTCTTTACCAGAGGAGAATAATGAGAGTTGACGTTGCAGATGCTGTGAAAGTAGCTGGCAGTTCTCAACCAACTGAGGGGGCCTTGGTTGATGAGCCTGAGGGAGGCTTTTTAAAATTGACAAAAACTCAAGAATGGTTGCTAGGTGAAACATCTCCACCACTCAATAGGAAGCCAACAAATACGGAACTGCAGGACGATAGAGATAGAACAAGAAGACTCAACATTCTTAGATATGAAGCTCTTAAGAGGGAACTTCTGTTCATGACTTTGGGGGTAGGAGCTGCATGTACTGGGTATTGCTTGTTAACCTTGTCAGTCCAGGTAAAGCCAATTGAAAGCATCATTTTGCGATTTTTGCAGGTCAGCGTTAATATTGTCAGCATTGGGAAACAAAATCTTGAAACAATTAACTAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39189.p1 GENE.S_Transcript_39189~~S_Transcript_39189.p1 ORF type:internal len:268 (+),score=34.28 S_Transcript_39189:3-803(+)
YTSRPSIQVGQFHCNHSVRAGIKTPIQIQGKTAADICFAIDSLTGHTVEMETLSRVSWLQFTRCPSLGRIPNKITIFPQYDFTLRSRMPTVSVLKTPSSASERAEEDLLEEFFRDRQLNGDLITRYSDILYQRRIMRVDVADAVKVAGSSQPTEGALVDEPEGGFLKLTKTQEWLLGETSPPLNRKPTNTELQDDRDRTRRLNILRYEALKRELLFMTLGVGAACTGYCLLTLSVQVKPIESIILRFLQVSVNIVSIGKQNLETINY

Click here to download the sequence:
Link to NCBI Protein BLAST