Transcript Information: S_Transcript_39194.p1


Annotated TAIR IDAT5G22340.2
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:7394509-7396609 | Forward length=340
E-Value2E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4193637486528
Replicate 24.5462717876091
Replicate 35.5328208250802
Condition 2: 8 Hour
Replicate 17.7546873880484
Replicate 26.5759676304651
Replicate 36.9760955798121
Condition 3: 24 Hour
Replicate 13.7070105317372
Replicate 25.3569009180458
Replicate 33.5922305667893


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39194.p1 GENE.S_Transcript_39194~~S_Transcript_39194.p1 ORF type:complete len:330 (+),score=42.88 S_Transcript_39194:150-992(+)
ATGGAGACTCTATCAAGGGTAAGCTGGCTACAATTCACCAGCTGCCCTTCCTTGGGTAGAAAATCCAATAAGCTTACCGTTTTCCCACAGTATGATTTTACTCTTAGAAGTAGAATGCCCACAGTCTCGGTCCTCAAGACCCCTTCTTCTGCTAGTGAACGTGCAGAAGAAGATCTCCTTGGAGAATTTTTTCGGGATAGACAGTTAAATGGGGATCTCATAACAAGATATTCTGATATTCTTTACCAGAGGAGAATAATGAGAGTTGACGTTGCAGATGCTGTGAAAGTAACTGGCAGTTCCCAACCAACTGAGGAGGCCTTGGGTGATGAGCCTGAGGGAGGCTTTTTAAAATTGACAAAAACTCAAGAATGGTTGCTAGGTGAAACATCTCCACCCCTCAATAGGAAGCCAACAAATAAGGAACTGCAGGATGATAGAGATAGAACAAGAAGACTCAACATTCTTAGATATGAAGCTCTTAAGAGGGAACTTCTGTTCATGACTTTGGGGGTAGGAGCTGCATGTACTGGGTATTGCTTGTTAACCTTGTCAGTCCAGGCAGCAGTGAGCTATGCTTCAGGAGTTGGATTCAGGTTAGCTCAAAGCTTTAACCTTATGTCCAAGTTACATGTTTTTCCACACATTATGACAGGAATGTCAACCTATACACTTCTTTACTTTCGAAAAATAATGTGTACTTTAACTGATGTTTGCTCTGAAGTAGAATGTGGATGGGTGGCAATGCTCAGGATGTTTACAAACTTATTTTTGTTGGCAAAACTTGGACATTTTGAAATTATAGATTTGATAAACTTGGCGTCATATCTTTGGGCTCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39194.p1 GENE.S_Transcript_39194~~S_Transcript_39194.p1 ORF type:complete len:330 (+),score=42.88 S_Transcript_39194:150-992(+)
METLSRVSWLQFTSCPSLGRKSNKLTVFPQYDFTLRSRMPTVSVLKTPSSASERAEEDLLGEFFRDRQLNGDLITRYSDILYQRRIMRVDVADAVKVTGSSQPTEEALGDEPEGGFLKLTKTQEWLLGETSPPLNRKPTNKELQDDRDRTRRLNILRYEALKRELLFMTLGVGAACTGYCLLTLSVQAAVSYASGVGFRLAQSFNLMSKLHVFPHIMTGMSTYTLLYFRKIMCTLTDVCSEVECGWVAMLRMFTNLFLLAKLGHFEIIDLINLASYLWAH*

Click here to download the sequence:
Link to NCBI Protein BLAST