Transcript Information: S_Transcript_39196.p1


Annotated TAIR IDAT5G22340.2
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:7394509-7396609 | Forward length=340
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4596901605735
Replicate 23.9713021203527
Replicate 32.7664104125401
Condition 2: 8 Hour
Replicate 14.6915858697693
Replicate 24.0269327551508
Replicate 34.4763279970461
Condition 3: 24 Hour
Replicate 12.8398348537772
Replicate 24.759400431033
Replicate 31.7655431083581


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39196.p1 GENE.S_Transcript_39196~~S_Transcript_39196.p1 ORF type:5prime_partial len:100 (-),score=11.26 S_Transcript_39196:60-359(-)
GAAACATCTCCACCACTCAATAGGAAGCCAACAAATAAGGAACTGCAGGATGATAGAGATAGAACAAGAAGACTCAACACTCTTAGATATGAAGCTCTTAAGAGGGAACTTCTGTTCATGACTTTGGGGGTAGGAGCTGCATGTGCTGGGTATTGCTTGTTAACCTTGTCAGTCCAGGTAAAGCCAATTGAAAGCATCATTTTGCGATTTTTGCAGGTCAGCGTTAATATTGTCAGCATTGGCAAACAAAATCTTGAAACAATTAACTACTCCCTATATTTTTTCAGACTGAAATATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39196.p1 GENE.S_Transcript_39196~~S_Transcript_39196.p1 ORF type:5prime_partial len:100 (-),score=11.26 S_Transcript_39196:60-359(-)
ETSPPLNRKPTNKELQDDRDRTRRLNTLRYEALKRELLFMTLGVGAACAGYCLLTLSVQVKPIESIILRFLQVSVNIVSIGKQNLETINYSLYFFRLKY*

Click here to download the sequence:
Link to NCBI Protein BLAST