Transcript Information: S_Transcript_392108.p1


Annotated TAIR IDAT1G79480.1
Annotated Gene NameCarbohydrate-binding X8 domain superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29897905-29899267 | Reverse length=397
E-Value2.8E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24641667810352
Replicate 20.13619005899701
Replicate 30.28461012474692
Condition 2: 8 Hour
Replicate 10.39491463550246
Replicate 20.34524457777356
Replicate 30.19736895930538
Condition 3: 24 Hour
Replicate 10.13484495981848
Replicate 20.2098501071884
Replicate 30.31138326426069


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_392108.p1 GENE.S_Transcript_392108~~S_Transcript_392108.p1 ORF type:complete len:324 (+),score=62.83,X8|PF07983.9|7e-22 S_Transcript_392108:265-1236(+)
ATGGAAGGAAGAAGAGATCAATGTAGCAGAACTTGGGTCAGGATCCTCCGTTACTTTATTTTGGTCCTTCTATTTACTCACTGCTATGCAAGAAAATCCATATTATTATCCAAGGAGGTAGCACATACAAAGAACAAAAATATAAAGCGCTTGACAATATTGGAATTAGCAAAGAACTTGAACATGGTGATGGATGTATCAATGAAAGACTCATCAAATCTTCAACCTTATGTAAGCTCCCCATTTACATTGCCACCATATGATTCTCTTGCTCCAATTCCTTTCCCTGATAATAATAATAATCCTCCTTATTGTGTTTATCCACCACCACAATCTCCTTCAACAACTATGCCCAACCCAGTTGGGCTTGGGCCTTCTCCTCCTTCTCCCTCCACTTCAAACCCAAATGCACCTCTCTTAAGCCCACCTCCAGGCCCATCAGAAACACTCCCCAGCCCACCATCTTTTATACCAGGGCCACCTGATATTATTACTCCTGGGCCCCCAGAGTATGTCCCCAGCCCATCTACATCAGTTCCAAATCCACCCTATTATGAGCCTACTCCGCCGAGTGGTGGTTTCCCTAGCCCACCGGATTATGTTCCAAGCCCAGTGGGCTTTGAGCCCAGCCCACCTGTGTTTCAGCCACCAGTGGTTTTCCCGACACCGCCACCACCAGCCTCAAGTGGTGGTGCGGCCCATGTTTGGTGTGTTGCAAAACCAACTGTGCCTGAACCAATTTTACAAGAGGCTATGAATTATGCTTGTGGATCAGGAGCAGATTGTGACCCAATTCAGCCCAGTGGGTCATGTTATCAGCCCAACTCAATTCTGAACCATGCATCTTATGCCTTTAATAATTACTGGCAAAGAACCAAAGTAGCTGGAGGAACATGTGAATTTGGAGGCACTGCCATGCTTGTCACTATGGATCCAAGTTCTGGTGGATGTAAATATGTCACAAACTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_392108.p1 GENE.S_Transcript_392108~~S_Transcript_392108.p1 ORF type:complete len:324 (+),score=62.83,X8|PF07983.9|7e-22 S_Transcript_392108:265-1236(+)
MEGRRDQCSRTWVRILRYFILVLLFTHCYARKSILLSKEVAHTKNKNIKRLTILELAKNLNMVMDVSMKDSSNLQPYVSSPFTLPPYDSLAPIPFPDNNNNPPYCVYPPPQSPSTTMPNPVGLGPSPPSPSTSNPNAPLLSPPPGPSETLPSPPSFIPGPPDIITPGPPEYVPSPSTSVPNPPYYEPTPPSGGFPSPPDYVPSPVGFEPSPPVFQPPVVFPTPPPPASSGGAAHVWCVAKPTVPEPILQEAMNYACGSGADCDPIQPSGSCYQPNSILNHASYAFNNYWQRTKVAGGTCEFGGTAMLVTMDPSSGGCKYVTNF*

Click here to download the sequence:
Link to NCBI Protein BLAST