Transcript Information: S_Transcript_392152.p1


Annotated TAIR IDAT5G51280.1
Annotated Gene NameDEAD-box protein abstrakt, putative
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20841456-20843645 | Forward length=591
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.039597445938
Replicate 221.913716655099
Replicate 323.396106079027
Condition 2: 8 Hour
Replicate 131.411723575236
Replicate 229.363051339641
Replicate 330.929582926823
Condition 3: 24 Hour
Replicate 126.051499568175
Replicate 221.783291869834
Replicate 322.537941706599


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_392152.p1 GENE.S_Transcript_392152~~S_Transcript_392152.p1 ORF type:complete len:592 (+),score=142.06,DEAD|PF00270.25|1e-47,DEAD|PF00270.25|3.5e+03,Helicase_C|PF00271.27|4.8e+03,Helicase_C|PF00271.27|1.1e-31 S_Transcript_392152:186-1961(+)
ATGGAGATCATGGAAGAGGATGACAATTACGAGGAGTACATACCCGTCCACAAGCGGAGGGCAATGGAAGCCCAGAAAATCCTTCAAAGAAAAAGGGAAGCCTTAGCGTTAGACGAAGATGAAGCTGAGAAAGCCAATGCCAAAAAAGCCAAACCCAGTTTGCTTGTCAAGGCTACCCAACTGAAAAAGGAGGTTCCTGAGGTCAGTCCTACCGAGCAAGCTGTGCAGCAAGAGAAAGAGATGATTGATCATTTGTCGGATCGAAAAACCTTGATGTCGGTTCGGGAGTTGGCAAAGGGGATCACGTATTCTGAACCACTATGGACCGGGTGGAAACCCCCCTTGGCTATCAGAAGGATGTCAAAGAAGCAGTGCGACATGATTCGGAAACAATGGCATATTATTGTTGAGGGTGAGGATGCCCCTTCACCTATCAAGAATTTTAGGGATATGAGGTTTCCGGAACCTATTTTGAGGAAGTTGAAGGGGAGGGGCATTGTTCAACCGACCCCTATCCAGGTGCAAGGTCTTCCTGTGATCTTGTCAGGGAGAGATATGATTGGGATTGCATTTACGGGGTCGGGGAAGACATTGGTTTTTGTCTTGCCCTTGATTATGGTGGCTTTGCAGGAGGAGGTTATGATGCCTATTGCTCCTGGGGAAGGGCCATTTGGGTTGATTGTTTGCCCATCGAGAGAGCTTGCTAGGCAGACATATGAGGTTGTGGAGCAGTTTTTGGCTCCTCTTAGGGATGCTGGTTATCCGGAGCTTCGACCATTACTTTGCATTGGTGGGGTTGATATGCGGTCACAAGTTGATGTTGTTAAGAAGGGTGTACATATAGTGGTTGCCACTCCAGGAAGGCTCAAGGATATGCTTGCTAAGAAGAAAATGAATCTCAACAATTGCAGGTATTTGTGCTTAGATGAGGCTGATCGATTAGTTGATTTAGGATTCGAGGATGACATCAGAGAAGTCTTTGATCATTTCAAAGCTCAGAGGCAGACGGTGTTATTCTCTGCCACCATGCCTACCAAGATCCAGAACTTTGCCAAAAGCGCATTGGTTAAACCTATTATAGTTAATGTTGGTAGAGCAGGAGCCGCAAATCTTGATGTTATCCAAGAAGTCGAGTATGTGAAGCAGGAGGCCAAAATCGTATACCTTCTTGAATGCTTGCAAAAAACCCCACCCCCTGTTTTAATATTTTGCGAGAACAAGGCTGATGTGGATGACATTCACGAGTACCTCCTCCTAAAAGGGGTTGAGGCAGTTGCCATCCATGGGGGCAAAGATCAGGAGGAGAGAGAATATGCTATAAAAGCCTTCAAAGCCGGAAAGAAGGATGTCTTGGTTGCCACTGATGTTGCCTCAAAGGGATTAGATTTTCCCGATATACAGCATGTTATCAACTATGACATGCCTGCTGAGATTGAAAATTATGTCCACCGAATTGGACGAACTGGTAGGTGTGGGAAGACGGGAATAGCAACAACCTTCATAAACAGAAACCAGAGTGAAACAACGCTGCTCGATTTGAAACACCTTCTGCAGGAAGCCAAGCAGAGAATACCTCCTGTGTTGGCCGACCTTGATGATCCAATGGAAGAGGCTGAGGCAATTGCCAGTGCCAGTGGAGTCAAAGGATGTGCTTATTGTGGAGGGCTTGGTCACAGGATCCAGAACTGTCCCAAGTTGGAGCATCAGAAGACCCAGGCACTCGTCAATTCCAGAAGAGATTATTTTGGAGGTGGCGGATATAGAGGAGAAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_392152.p1 GENE.S_Transcript_392152~~S_Transcript_392152.p1 ORF type:complete len:592 (+),score=142.06,DEAD|PF00270.25|1e-47,DEAD|PF00270.25|3.5e+03,Helicase_C|PF00271.27|4.8e+03,Helicase_C|PF00271.27|1.1e-31 S_Transcript_392152:186-1961(+)
MEIMEEDDNYEEYIPVHKRRAMEAQKILQRKREALALDEDEAEKANAKKAKPSLLVKATQLKKEVPEVSPTEQAVQQEKEMIDHLSDRKTLMSVRELAKGITYSEPLWTGWKPPLAIRRMSKKQCDMIRKQWHIIVEGEDAPSPIKNFRDMRFPEPILRKLKGRGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEVMMPIAPGEGPFGLIVCPSRELARQTYEVVEQFLAPLRDAGYPELRPLLCIGGVDMRSQVDVVKKGVHIVVATPGRLKDMLAKKKMNLNNCRYLCLDEADRLVDLGFEDDIREVFDHFKAQRQTVLFSATMPTKIQNFAKSALVKPIIVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAIKAFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINRNQSETTLLDLKHLLQEAKQRIPPVLADLDDPMEEAEAIASASGVKGCAYCGGLGHRIQNCPKLEHQKTQALVNSRRDYFGGGGYRGEI*

Click here to download the sequence:
Link to NCBI Protein BLAST