Transcript Information: S_Transcript_392211.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value9E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21724898967494
Replicate 20.3151827079645
Replicate 30.15055294762123
Condition 2: 8 Hour
Replicate 10.52225445674611
Replicate 20.31959783771038
Replicate 30.30451210864259
Condition 3: 24 Hour
Replicate 10.26748836927258
Replicate 20.092505353372847
Replicate 30.10294712002088


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_392211.p1 GENE.S_Transcript_392211~~S_Transcript_392211.p1 ORF type:complete len:490 (+),score=44.08,RVT_1|PF00078.23|1.2e-46 S_Transcript_392211:2578-4047(+)
ATGAAGATATTAAGCAAGAATTCATCATTCTACCAGCAACTTTTGGGTACCAGAACTGAGGAATTACCTATGGTAGACAAAAATACTATGAGAAGAGGGCCTGTACTGTCTAGACATGATCAAGTAAGTCTCTGCCAACCTATAACTGACGAGGAGATAGAGAAGGGACTTTGGGGTATAGGTGATGAGAAAGCGCCAGGTATAGATGGATACAATGCCTGTTTCTTCAAGAAAGCTTGGCCTATTTTAAAGAAGGATGCTTGTACTTCCATTAGAGATTTTTTTGTGACTGGAAGGATGTGGAAGGCTGTTAACTACACTCTTATTACCCTGATCCCAAAGGTTGACAAGCCTAATACTGTGAAAGAGTTTAGACCAATAGCTTGCTGCACAATGCCCTACAAGATTATTGCTAAAATACTTACAAATAGACTGCAGAAGATCTTGAGTAAACTTATCGGCGCCCCTCAATCAGCCTTTATTCCGGGCAGACACATAGTTGATAATATTGTACTATGTCATGAGCCAGTACAGGGTTATGGGAGAAAACACCTGTCTTCTCGATGCATGATCAAGATAGACCTCCAAAAGGCTTATGATAGCCTGGAATGGTGCTATCTAAAACAGGTTTTAGTGGAATTGGGGTTTCCTTCCCCTTTTATTGATTGGATTATGACCTGTGTATCAAGTGTGAGCTATGTCCTGAACGTAAATGGTGAGTTGATGAAGCCTATTGAAGCGAAGAGGGGACTTAGACAAGGTGACCCGCTCTCCCCTATCCTCTTTGTAATAGCTATGGAATACCTTACCAGGTGTATGGATGAACTTCAGGACAAGTGGGATTTCAAATTCCACCCTAAATGCAAAAAAGTGAGTTTGACTCACTTATGTTTTGCCGACGACCTTATGCTATTCAGAAAAGGAGAGATGGGATCTATTGCTTTAATGCATGAGACGTTCAGGAAATTCTCAAAGGCCTCGGGACTCACAGCAAATATGGGGAAAAGTTCTATTTACTTTGGAGTTCATGAGGTCATTCAGAAGAGCATCCTGGAGCAGCTGGGATATCAAAAAGGGGAGCTACCAGTCAGGTACCTGGGTATGCCTTTATCCAGCAAAAAAATTACAGTTGCACAATGCAAACCTCTTATTGATAAAATAATGGCAATGATTGATAATTGGGCTGCTAGACTACTGTCCTATGCAGGTAGAATACAGCTGATAAGGTCTGTAATCTTTGATATACAGGCCTTCTGGTCACAGATTCTGCTGATTCCAAAACAGGTTTTGAAGACCATAGAAAGTAAATGCCTAAATTTTCTATGGTCAGGAAAAGATAAAGGGGGCAAACCAGTTAAGGTGGCGTGGGAGAACATCTGTATACCAAAAACTACAGGTGGCCTAAATGTTATGAATATCTGCTTATGGAATAAAGCTGCTATTTTCAAGTTGTTTTGGGCGATGGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_392211.p1 GENE.S_Transcript_392211~~S_Transcript_392211.p1 ORF type:complete len:490 (+),score=44.08,RVT_1|PF00078.23|1.2e-46 S_Transcript_392211:2578-4047(+)
MKILSKNSSFYQQLLGTRTEELPMVDKNTMRRGPVLSRHDQVSLCQPITDEEIEKGLWGIGDEKAPGIDGYNACFFKKAWPILKKDACTSIRDFFVTGRMWKAVNYTLITLIPKVDKPNTVKEFRPIACCTMPYKIIAKILTNRLQKILSKLIGAPQSAFIPGRHIVDNIVLCHEPVQGYGRKHLSSRCMIKIDLQKAYDSLEWCYLKQVLVELGFPSPFIDWIMTCVSSVSYVLNVNGELMKPIEAKRGLRQGDPLSPILFVIAMEYLTRCMDELQDKWDFKFHPKCKKVSLTHLCFADDLMLFRKGEMGSIALMHETFRKFSKASGLTANMGKSSIYFGVHEVIQKSILEQLGYQKGELPVRYLGMPLSSKKITVAQCKPLIDKIMAMIDNWAARLLSYAGRIQLIRSVIFDIQAFWSQILLIPKQVLKTIESKCLNFLWSGKDKGGKPVKVAWENICIPKTTGGLNVMNICLWNKAAIFKLFWAMA*

Click here to download the sequence:
Link to NCBI Protein BLAST